Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02847 ATGGCAACCCCATTAGAAAGGGAAGCTTTTCATCAATTCCCAAAGAATTTGCAAACCATCGTTTTCCAAGATACTCTCTCTTCCTTCCGTCTCCTTCCACAAATGCAGACTGAGAATGCTGTTTCCGCCGTCCATTTACTCCTCCAAAGTGTAGAGGCGTCGCTGCCGAAACAGAAAAAGAACATGGCTGTAACAGAATTTAAGCGAGCAATGGTTGCTCATAAGAGGCGCGCTAAAGCTCACCAGGTAGAGGAAGGTTCATTCCAACTACCTCAAGATATTCTTGTACACATTTTCAGTTTTCTAGATATGCAATCTTTGGTCTCAGCGGGGATAGTCAACTGGTCATGCAACGTGGCTGCAAATGATAACCATCTATGGGAATCACAGTATTCTGTACTGTATGACACTGCTGCTAAACAGCCCCCTAAGAGACCTGATGATAAGCTTTTACATAAACCCCTTGATACTAGGACGGTTACTGACTGGAAAGAGGCTGTTAAAGGATCATACACTGGAGCATTATCCAAGAAATTAACAACCAATAGAGGATACTGTGAACGCTGCAAAGCTATAGTTTGGTTAAACAATTCAAAATGCCCCAATGTACATGGAGGAAGGATATCTGAAATTCATGATACCAAACCTGTAACGCAATTCCAGGTTGTGGAATATCTTCTACATGATTCTCTATCCATAGCATCTTCTTCAGACAGTGACACTGATTCAGAAGGAGGACCAGTTTCTAAGTTTTGGGATATACATTTAAGAAAATACTAG 780 0.4154 MATPLEREAFHQFPKNLQTIVFQDTLSSFRLLPQMQTENAVSAVHLLLQSVEASLPKQKKNMAVTEFKRAMVAHKRRAKAHQVEEGSFQLPQDILVHIFSFLDMQSLVSAGIVNWSCNVAANDNHLWESQYSVLYDTAAKQPPKRPDDKLLHKPLDTRTVTDWKEAVKGSYTGALSKKLTTNRGYCERCKAIVWLNNSKCPNVHGGRISEIHDTKPVTQFQVVEYLLHDSLSIASSSDSDTDSEGGPVSKFWDIHLRKY 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02847 259 SMART fbox_2 90 130 IPR001810 GO:0005515
Vifa3g02847 259 PANTHER OS05G0526300 PROTEIN 6 253 - -
Vifa3g02847 259 Pfam F-box-like 89 130 IPR001810 GO:0005515
Vifa3g02847 259 Gene3D - 73 178 - -
Vifa3g02847 259 ProSiteProfiles F-box domain profile. 84 130 IPR001810 GO:0005515
Vifa3g02847 259 SUPERFAMILY F-box domain 89 138 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02847 Vifa-Chr3 799562815 799565713 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02847 - - tpra:123903739 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02847 3 799562815 799565713 Vifa3g02847 3 799562815 799565713 ECH