Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02834 ATGGACACAGACGGCTTATCCCAAATCTGCAGCGGCCTTGGATCCATTGAAGAAGACGACGATGGAAACCGAACCGGTTACTCAAAAGGCGAATACTGTCTCGATAACCTGAAAGACTTGCTGAGGTTTTTGAGACGTGATGATCCGGAAACACGAAATGTCTTCAAGCAAGTGTGTAAATGGAACGTCGTTTCTAAGGATTTGGTACCGATCATCGAGCATTACCACGAAGATCGTAGCATGCTTCTGAATGCAGTGAAGGTTTTGGTGTTCCTTACAATGCCGATTGAGCCTGGTTCTACTGATATACCTCAGCAGTTGGAGTATTTGTGGGATCTGAAGTCTGCTGTGACTAACAGTGATGTTGCTACAGTGATAGTGTCCATTTTAGAAAAGCCACTTGAGAATTTGGAACTTAATAAATTCACAGAAGATGATTGGAAATTGGTACAGCTGGTGTTTACATTATTTAGAAATATACTTGCTATTCAAGAAATCCCATTGCATCAGAAATCAGCAGGGTTTGCTAGTCAATTTTTATCACTGAGAGATAGATTTCTGGAACTTTTGTTTCGTGAGAATGTGATGGATATAATCTTGGTTGTATCTCAAAATGTTGGCAGCTCTAATGTTTATCTACGTCAGGATAATTTGCTTCTATTGGAAATATTCCATTACATTTTTATGGGTCAGGAGCCAGAGTTGATTGTCCGGGGCCATTCGAATGGATTGAAGGTTGAGGAAGACTCCCAAGCTTCTCTTGATAGTCTCCAGTCTATCATGGAGGAAGAAAAGAAGAAAAGAGTTATCAATAGGCTTGGCAATATCAGTCGGCATTCACAATTCAGTGGAACATTTGCACGGGTTACCATGGATGGTTCTAAAGCCGTGTTTAAGGGGAATCCTAATTCTTCCCGTAATATGCATCTTAAATCAAAAAATGTCATTCGAGGTCGAGCCAAAAAAATTGCGTGGGATCATCCAAGGTTGCCTTCAACAAAGGACAAGATCTTGGAGATGCTGAAAGGATTTGTAAATCAGTTTCTTTCTGGGGGATACAACGTTTTGATGCGATCGGTCCGTGAAGATATTGTAAAGGAACATCCTGCAATTCAGAAAAGTGACGTTGTTGTTTTCTTTCAAGTGGCCGACTTTATCTCTTCATTTCAGTTTCACAAGTATTCAACTTCAAAGACGGAGGAAGAAAAAGACATATCTGGTGATAATGATGCCAACGCTTCAGATTTCAGTGGTAAAATATGTGGCCCAATTGAGGCATCGTTGAATGAGTCAATGTTTCAACTGGTTATTTCACGTTGGCGGCAGGCCTATGAAGGTCTAAAGGAAACCAATGACTACAAGTTTCTATCTGCAGCTGGTTCTCTTTTGAAAAACATGATTCGCATGCTGGATTTAGTACTTAAGTCGTTGCCAGATGACTCAAAGGAGCCACAAACAGCCCGCATTCTTCTGTATAAATTATTTTATGATCAGACTGAAGAAGGGATGACTCAGTTCCTCTTAAATTTGATCAAAACGTTTGACACACACAAACAATGCAAAAGTGATCTTGCAGATTTGGTTGAAATCATTTGCAAAGTCGTGAAGCTAATGGATTATCTTCAGTCTCGAGGAACATTAAGGGTGTCAAAAAAAGCAAGGAAATTGAAAAAGAAAACTTCCAATGGACCAGAATCAGGGAATAAACCAACTGGAGATCATTCTTGTGTTAATAAAGAAGCTGGCATTTCTATTGACAATCCTTTAGGTGAAAACCATTTGCTACAAAAGGAATCCCTACCAAATGTAATCTCCACTGATCAAGAGGGCATCCCTGATGATAATGAACATGGAAGTCTCGAGAAAGATGTGAACTCTCAAGTTCACTTGGAATCAATGGAAAACAAACATCTTGATGATAATGAAAACAAAAATGCCAAGGGAGATGTGAACTCCCAAGTTCCTTTGGAATCAATGGAAAACACACATCTTGATGATAATGAACATGAAATTGTCAAGGGAGATGTGAACTCCCAAGTTCCTTTGGAATCAATGGAAAACACACATCTTGATGATAATGAACATGAAATTGTCAAGGGAGATGTGAACTCCCAAGTTCGTTTAGAATCAATGGAAAACACACATCTTGATGATAATGAACATGATAATGTCAAGGGAGATGTGAACTTCCAAGTTGGTTTGGAATCTGTGAAAAAGACAAATCTTGATGATAATGAACACAAAAATGTTGAGGAAGATGTGAACTCCCAAGTTGGTTTAGAACCAATAGAGAACACAAATCTTGAACATCTTAATGAGGATATGTTGGATGACACTGGTGATTTTTCTGAAGAAGAGCAATTAAATACAACTAGTGAAGTTGATTTCAATGTTTCAACGCTTGTTTCCGCTTTTGCAAATCACAGCATCATTCAGAAATTATGTTGGTTGCTCAAGTTTTATAAAAGCAATTCCCTTGCTATAAATCATTACATAATAAGCATGTTGCGGAGAATTAGTGATGAGCTTGAACTCCATCCCATGCTCTACCAGTTGTCGCTGCTCACAACTTTCTATGATATTCTTGCTGAACAAAAGTCATGCCCCTGCAAGGAATATGCAAGTATTGTTGATTTCCTGAACAGTTTGGTCAGAAAGATGCTAAAGAAAATGAAAAAGCAGCCCCTCCTATTTGTTGAAATTCTTTTCTGGAAGACCCGAAGGGAATGCCATTACATCAATGTAGAGTATATGTTGGATGAACTTGGCCATTTGAGAAAAGGAACTAAAAATTGGAACAATACTCAAGGAGATGGAGAAATTGGTTCCTCCCCTGTGAAGACGCAGACTCGTAGAAGTATTGCTGATGCACTTGGTGATGATGAAGCGGATGTTGTGATATCTCATGAATCAAGATATCAAAACAATGGGGAAAAACTTGATGATGTTGAAGGCTTTGCTTCTACATCAGGCCGTAAGAATGGCAGAGATGCTAACAATGGGGAGCCATGGTTGGAAGATGAATCTCAAACAGCTCCGAGAAGAAAGAAAAAACTTGTTCTAGATGCTGAATTGGAGATGCAAATTAAGAATCTCTATGAGAAATTCAAAGATGACCGAAATTGTAGTCGACTTATTGCTGAAGAACTAGATCCAGATGGTAAAATTTCTCCAGCTCAAATATCCAACAAATTGAAAAAACTAGGGCTAACAATTGCTTCGAGGAAAAAGAAGGGTGATGCTAATGAGACTTTCTCAACAAGCCCTAATCAATTAGAAGGTGGCGGAGTAGCTGAAGCTGTGAATTTAGAGGGAAGCCTGTTGGTTCAGCATCGGCAGAAAAGAAAAAGAGTCAGTGCTTTCAGTGAAGATCAGGAAGCCCGTATCAAAGTTCTATATGAGCAATTCAAGGACCATAGAAGATGTAGCTATATGATAGCCAATGCACTGGACGTGGATGGTAAATTCACACCTGCCCAAGTCTCTCGAAAACTTAAGCAACTTGGCTTATATGTTCCGCAAAAGAGGTCTAGAGGAAATATCCACCCAAAGGGGGAGGATCTTATGGATTATTCTAAGGATGGAATGGATGAATCTGACGATGAGCCATTGGTATCATTGATAGAAAGGAAAAAAGTGAAGAATGGAACAAAATCAAGCAAACCATTACATGAACAGACCAATGAGGATAAGCTGTCAAAAGATGATTCTGATGATGAAATACTTGGCTCCATCCTCAAGAAAAAAGGGAAGAAAAGAAAAGAATCAAGCAAACAGGTACATGAACAGACCGGTGAGGATAAATTGTCAAAAGATGATTCTGATGATGAAATACTCGGCTCTATCCTCAAGAAAAAGAAGAATAGATCTGTATCTGGTGAACATTCACATAAAAATACCAATGATGGTGGATTGTCTAGATACGATTCCGAAGATGAAATTCTTCAATCTGCACTGAAGAAAAAGAAGAATAGTTCTGTATCTGGTGAACATTCACATAAAAACACCAATGAGGGTGAATTGTCTAGATACGATTCCGAAGATGAAATTCTTCAATCTGTGCTGAAGAAAAAAAAGAATAGATCTGTATCTGGTGAACTATTACAAGAAAACACCAATGAGGGTGAATTGCCTAGATACGATTCCGAAGATGAGATTCTTCAATCTGCACTGAAGAAAAAAAAGAATAGATCTGTATCTGGTGAACTATTACAAGAAAACACCAATGAGGGTGAATTGCCTAGATACAATTCCGAAGATGAGATTCTTCAATCTGCACTGAAGAAAAAAAAGAATAGATTTGTATCTGGTGAACTATTACAAGAAAACACCAATGAGGGTGAATTGCCTAGATACAATTCCGAAGATGAGATTCTTCAATCTGCACTGAAGAAAAAAAAGAATAGATCTGTATCTGGTGAACTATTACAAGAAAACACCAATGAGGGTGAATTGCCTAGATACAATTCTGAAGATGAGATTCTTCAATCTGCACTGAAGAAAAAAAAGAATAGATCTGTATCTGGTGAACTATTACAAGAAAACACCAATGAGGGTGAATTGCCTAGATACAATTCCGAAGATGAGATTCTTCAATCTGCACTGAAGAAAAAAAAGAATAGATCTGTATCTGGTGAACTATTACAAGAAAACACCAATGAGGGTGAATTGCCTAGATACAATTCCGAAGATGAGATTCTTCAATCTGCACTGAAGAAAAAAAAGAATAGATCTATATCTGGTAAACATTTACATGAAAACACCAATGATGGTGAATTGTCTAGATACGATTCTGAAGATGAAATTCTTCAATCTGCACTGAATGAAAATCAAGTAGGTTTTAAGAATTCCCAAGTAGAAAATAAGCAAGTGGATCCTGACTTGGAAGATTCAGAGGATGATATGGCTGTTAATGTACTTCCTGACAATGCTGTATCAAGAAGAAAGCTGAGAATGGTGATGGATCTTGAGGACGATGACTGA 4983 0.3817 MDTDGLSQICSGLGSIEEDDDGNRTGYSKGEYCLDNLKDLLRFLRRDDPETRNVFKQVCKWNVVSKDLVPIIEHYHEDRSMLLNAVKVLVFLTMPIEPGSTDIPQQLEYLWDLKSAVTNSDVATVIVSILEKPLENLELNKFTEDDWKLVQLVFTLFRNILAIQEIPLHQKSAGFASQFLSLRDRFLELLFRENVMDIILVVSQNVGSSNVYLRQDNLLLLEIFHYIFMGQEPELIVRGHSNGLKVEEDSQASLDSLQSIMEEEKKKRVINRLGNISRHSQFSGTFARVTMDGSKAVFKGNPNSSRNMHLKSKNVIRGRAKKIAWDHPRLPSTKDKILEMLKGFVNQFLSGGYNVLMRSVREDIVKEHPAIQKSDVVVFFQVADFISSFQFHKYSTSKTEEEKDISGDNDANASDFSGKICGPIEASLNESMFQLVISRWRQAYEGLKETNDYKFLSAAGSLLKNMIRMLDLVLKSLPDDSKEPQTARILLYKLFYDQTEEGMTQFLLNLIKTFDTHKQCKSDLADLVEIICKVVKLMDYLQSRGTLRVSKKARKLKKKTSNGPESGNKPTGDHSCVNKEAGISIDNPLGENHLLQKESLPNVISTDQEGIPDDNEHGSLEKDVNSQVHLESMENKHLDDNENKNAKGDVNSQVPLESMENTHLDDNEHEIVKGDVNSQVPLESMENTHLDDNEHEIVKGDVNSQVRLESMENTHLDDNEHDNVKGDVNFQVGLESVKKTNLDDNEHKNVEEDVNSQVGLEPIENTNLEHLNEDMLDDTGDFSEEEQLNTTSEVDFNVSTLVSAFANHSIIQKLCWLLKFYKSNSLAINHYIISMLRRISDELELHPMLYQLSLLTTFYDILAEQKSCPCKEYASIVDFLNSLVRKMLKKMKKQPLLFVEILFWKTRRECHYINVEYMLDELGHLRKGTKNWNNTQGDGEIGSSPVKTQTRRSIADALGDDEADVVISHESRYQNNGEKLDDVEGFASTSGRKNGRDANNGEPWLEDESQTAPRRKKKLVLDAELEMQIKNLYEKFKDDRNCSRLIAEELDPDGKISPAQISNKLKKLGLTIASRKKKGDANETFSTSPNQLEGGGVAEAVNLEGSLLVQHRQKRKRVSAFSEDQEARIKVLYEQFKDHRRCSYMIANALDVDGKFTPAQVSRKLKQLGLYVPQKRSRGNIHPKGEDLMDYSKDGMDESDDEPLVSLIERKKVKNGTKSSKPLHEQTNEDKLSKDDSDDEILGSILKKKGKKRKESSKQVHEQTGEDKLSKDDSDDEILGSILKKKKNRSVSGEHSHKNTNDGGLSRYDSEDEILQSALKKKKNSSVSGEHSHKNTNEGELSRYDSEDEILQSVLKKKKNRSVSGELLQENTNEGELPRYDSEDEILQSALKKKKNRSVSGELLQENTNEGELPRYNSEDEILQSALKKKKNRFVSGELLQENTNEGELPRYNSEDEILQSALKKKKNRSVSGELLQENTNEGELPRYNSEDEILQSALKKKKNRSVSGELLQENTNEGELPRYNSEDEILQSALKKKKNRSVSGELLQENTNEGELPRYNSEDEILQSALKKKKNRSISGKHLHENTNDGELSRYDSEDEILQSALNENQVGFKNSQVENKQVDPDLEDSEDDMAVNVLPDNAVSRRKLRMVMDLEDDD 1660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02834 1660 MobiDBLite consensus disorder prediction 1256 1346 - -
Vifa3g02834 1660 MobiDBLite consensus disorder prediction 1376 1400 - -
Vifa3g02834 1660 MobiDBLite consensus disorder prediction 1521 1544 - -
Vifa3g02834 1660 MobiDBLite consensus disorder prediction 1581 1599 - -
Vifa3g02834 1660 Pfam Timeless protein 27 287 IPR006906 -
Vifa3g02834 1660 MobiDBLite consensus disorder prediction 1485 1508 - -
Vifa3g02834 1660 MobiDBLite consensus disorder prediction 1557 1572 - -
Vifa3g02834 1660 MobiDBLite consensus disorder prediction 978 1015 - -
Vifa3g02834 1660 MobiDBLite consensus disorder prediction 551 580 - -
Vifa3g02834 1660 MobiDBLite consensus disorder prediction 1179 1246 - -
Vifa3g02834 1660 MobiDBLite consensus disorder prediction 999 1015 - -
Vifa3g02834 1660 PANTHER TIMEOUT/TIMELESS-2 2 1396 IPR044998 -
Vifa3g02834 1660 MobiDBLite consensus disorder prediction 1601 1621 - -
Vifa3g02834 1660 MobiDBLite consensus disorder prediction 1176 1346 - -
Vifa3g02834 1660 MobiDBLite consensus disorder prediction 1463 1636 - -
Vifa3g02834 1660 MobiDBLite consensus disorder prediction 1358 1417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02834 Vifa-Chr3 796481107 796499464 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02834 K10997 - mnt:21394741 1248.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02834 3 796481107 796499464 Vifa3g02834 3 796481107 796499464 ECH