Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02799 ATGTTCCTTCATCAAACCACCACCATCATTCTCCGAGCAAACCTCCCCATTTTCCGACGACACTTTAGTCTCTGGTCAATGAAAAAGGACCCAGACTTAGAATCAGCCCTATCACGAAACCGACGTTGGATCATAAACAACCAAATCAAAAACATAATCCTCCGTTACCCTAACAACGAAATCCCAATCGAAACTCTTCAGAAGAAATTCAAAACCCTAGATCTTCAAGGTAAAGCCCTCAATTGGATTTCCAAGTACCCCTCTTGTTTCCAACTTCACCAACGTCGCATTCGTCTCACCAAACGCATGATCGACCTCGTTCATCAAGAACAAACCATCAAAGATTCGCTTGACGCTGTTTTCGCCCAGCGTCTCGCCAAACTTCTCATGCTTTCGGTTAATAATACCCTCAATGTATTAAAAATCAATGAAATCAAGAACACTTTAGGGTTTCCTGATGATTATTTGATTCGAATTGTGCCCAACTATCCTGATCTGTTTCGAATTGTTAATGAGAGTGGGAGGAGAAGCTCTATGGCGATTGAGCTGATTCATTGGAACCCTAGCTTTGCGGTTTCTGAAGTTGAAGCTTCGGCTTTGAAAAACGGGGTTGACCCGAATTTCAAATGCTGTTTGCCTTCTAGTTGGGTGAAATCGTTGGAGAAGTTTCGCGAATTTGAATCAGTTCCTTATGTTTCGCCGTATTCGGATCCCAGAGTTTTGGTGGACGGGTCCAAGGAGATGGAGAAGAGGAATGTGGGTTTGGTTCATGAGTTGCTGTCATTGACTCTTTGGAAGAAGGTTTCAATTATGAAATTGGGTCATTTTAAAAGAGAGTTTTTTTTGCCTGATAAGTTGAATGTGTTGCTGCTTAAGCATCCTGGGATTTTCTATGTTTCTAATAAGTATAGGATTTATACTGTTTTACTTAGAGAAGGGTATGTTGGGTCTCAGTTAGTTGATAAGGATCCTCTTGTGGTTGTTAAGGAGAAATTTGGGGAAATTATGCAGGAAGGACTTCACGAGTATAACCAAAGGCGGCGCATGGTTAATGTCGAAAAGAAGAGAAACAAAGGTGTTCCTTTGAGTAGGGTGGATGAGGATGAAATGAACGGTAGAAGAAGGAGAAGAAGAAGCAGTGAAGTTTCTGATGAAGATGATGATGATGTTGTTGATGGAGGAAATGGTAATAAGTTGGGAGGGTTGCTTGACCCTGAAGAGAGAAAACGGTTTTATAAAGTTCTTTTTGAGGATGATGGTTCATGA 1266 0.4123 MFLHQTTTIILRANLPIFRRHFSLWSMKKDPDLESALSRNRRWIINNQIKNIILRYPNNEIPIETLQKKFKTLDLQGKALNWISKYPSCFQLHQRRIRLTKRMIDLVHQEQTIKDSLDAVFAQRLAKLLMLSVNNTLNVLKINEIKNTLGFPDDYLIRIVPNYPDLFRIVNESGRRSSMAIELIHWNPSFAVSEVEASALKNGVDPNFKCCLPSSWVKSLEKFREFESVPYVSPYSDPRVLVDGSKEMEKRNVGLVHELLSLTLWKKVSIMKLGHFKREFFLPDKLNVLLLKHPGIFYVSNKYRIYTVLLREGYVGSQLVDKDPLVVVKEKFGEIMQEGLHEYNQRRRMVNVEKKRNKGVPLSRVDEDEMNGRRRRRRSSEVSDEDDDDVVDGGNGNKLGGLLDPEERKRFYKVLFEDDGS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02799 421 Pfam Plant organelle RNA recognition domain 28 339 IPR021099 GO:0003723
Vifa3g02799 421 MobiDBLite consensus disorder prediction 360 403 - -
Vifa3g02799 421 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 23 369 IPR045040 GO:0003723
Vifa3g02799 421 MobiDBLite consensus disorder prediction 360 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02799 Vifa-Chr3 781631695 781632960 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02799 - - gmx:100814115 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02799 3 781631695 781632960 Vifa3g02799 3 781631695 781632960 ECH