Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02798 ATGGCGGATCGGGGAGAAGACGAGGATTTGGAAATGGCGATTCGGATGAGCATGACGCCGGAGCCGAAGCGGAACAAGCCTAGGGACGAAGTCGCGGGGGTTGTTTCGGGGTTGCCGGAGGATTCGCCGGAATCCAAGACTCGGAGGCGGGAGCTCATGGCTGCGGCGGCTGAGAAGCGGATGGCGACTGTGGTTAGGGTTTCGCCGTTGTCGCCGGTGGGGAATAAAGAATTGAAAAAAGGGGGTGAAGTTGTGAGGAGAGTGGAGGAATTGCCTCTGAGAGATGAGAGTCTGTGTAAGGAGCTTTCTGCGGAGGAAGCTAATAAGTTATTTGTTATGGTGTTTGGAAGTCAAGTTTCGAAGGATATTCTTGCACAGTGGTGCAACCAGGGAATAAGGTTTAGCTCTGATCCTGAAACATCAATGGGCCTAGTGCAGCATGAAGGAGGCCCCTGTGGCGTTTTGGCAACTATACAGGCATTTGTGCTCAAATACATTATTTTCTTCAGTAATGAATTGTCACGCATACCACAGAATCGGGGTCTGGGTGTGTCAAGTAAAAGTCACTCTGTTCCATCATATAATATTTCTTCACTCACTGAAGATGTAAAAGTAAGAGCCCTCGTAAGAAGTATGGGTGAAATTTTATTTTCTTGTGGAAGTAATAAAAGGGCCGTGATTGCAACTTTGAGCATTCCGGGGAATGATATTCAACGTTTTGAAGGAATCTCAGAGGATGAGGTTGTTGCAAGCTCACTTAAAGCTCTTTCCATTGAGTCTTCCTTGGATCTGCTGAAAGTTCTTAGAGTTGAAACTCACACGTCAGAAACAACTGCTTTTCAGAGGCTTGAAGCAATTATTCCTTTATTTCAAAGTCGTATGGGGGCATTGCTCTTCCTAATCTCTGCTTTACTTTCTCGTGGACTGGATTTGGTTCAAAGTGACAGGGATGATCCCAGCCTACCCCTGGTTACTGCTCCTTTTGGGCATGCCTCCCAGGAAATTGTAAACCTACTGCTCTGTGGGCAGGCTGTTGCAAATGTATTTGATGGAAGGATGGATTTAGGTGGAGGAATGTTTCTGAAAGGTATATCCCGAAATGTGGAAGTTGGATTTCTCACCCTGCTAGAATCCCTGAATTTCTGCAAGGTTGGTCAGTTTCTGAAAACCCCGAAATGGCCTATATGGGTTGTTGGGAGTGAATCCCATTACACAGTGTTGTTTGCTCTTGATCCCACCGTTCAAAACGAGAATGAATTGGAAGGAAGGGAAACACAGATCCGCAAAGCTTTTGATGCACAAGATCAAAGTGGAGGTGGCGGCTTCATTAGTGTGGAGGGGTTCCATCAAGTCATCAGAGAAACAAATATCAAACTTCCACAAGTGAAGCTAGATAACCTCTGCAGCGCAGGGTTCATTGTATGGAGTGAATTCTGGCAGGTGATTTTGGACTTGGACCAAAGCTTGGGAGGCTTGAAAGATTCATCAGGATTGATGGTTCCCCCAAGGTGGACACCTGAGGAATTTATGGCAGATGTGCAAGGTCCATCAGCTTCTGGTGCAAGTGACTCTACTGGGAAGGACATTGAGGTATCTAAACCAGAGCCTGTTCAGCATGCGCCTTTGGTTGACTGCGTAAGGACACGTTGGCCACGTGCTGTCTGCAACTGGTCGGGTGATCCCCCTAGTATAGTCTGA 1698 0.47 MADRGEDEDLEMAIRMSMTPEPKRNKPRDEVAGVVSGLPEDSPESKTRRRELMAAAAEKRMATVVRVSPLSPVGNKELKKGGEVVRRVEELPLRDESLCKELSAEEANKLFVMVFGSQVSKDILAQWCNQGIRFSSDPETSMGLVQHEGGPCGVLATIQAFVLKYIIFFSNELSRIPQNRGLGVSSKSHSVPSYNISSLTEDVKVRALVRSMGEILFSCGSNKRAVIATLSIPGNDIQRFEGISEDEVVASSLKALSIESSLDLLKVLRVETHTSETTAFQRLEAIIPLFQSRMGALLFLISALLSRGLDLVQSDRDDPSLPLVTAPFGHASQEIVNLLLCGQAVANVFDGRMDLGGGMFLKGISRNVEVGFLTLLESLNFCKVGQFLKTPKWPIWVVGSESHYTVLFALDPTVQNENELEGRETQIRKAFDAQDQSGGGGFISVEGFHQVIRETNIKLPQVKLDNLCSAGFIVWSEFWQVILDLDQSLGGLKDSSGLMVPPRWTPEEFMADVQGPSASGASDSTGKDIEVSKPEPVQHAPLVDCVRTRWPRAVCNWSGDPPSIV 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02798 565 PANTHER UNCHARACTERIZED 6 564 IPR039785 GO:0004843|GO:0071108|GO:1990380
Vifa3g02798 565 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 5 24 IPR003903 -
Vifa3g02798 565 Pfam Deubiquitinating enzyme MINDY-3/4, conserved domain 113 420 IPR025257 -
Vifa3g02798 565 SMART DUF4205_3 111 477 IPR025257 -
Vifa3g02798 565 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02798 Vifa-Chr3 781363731 781373624 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02798 K22647 - gmx:100813222 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02798 3 781363731 781373624 Vifa3g02798 3 781363731 781373624 ECH