Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02788 ATGCCAGCGACGGACTATCAGAGTTCGTCTCCTTCATCGTTAACGCAGTTCGGTCGTTCAATTCTAAGCTTTCGTCGTGAACAGGAGGATTTGCTTTCGTTGAAATGGATTGGGAAGCTTCTGGATTGTTTTCTGGTTTGTCAGGAGGAGTTTAAGGCTATCCTTTATAGCCATAAGAGACAGGCATCGAGATCGCCGTTGGATCGAATGGTGTCGGATTATTTTGAGCGGAGTGTGAAGGCTTTGGATGTTTGTAATGCGATTCGTGATGGGGTTGAGCAGATTCGGCTTTGGCAGAAGCTGTTGGAGATTGTTCTTTATGCATTGGATCATGAGAGGAGTATTGGTGAAGGGCAGTTTCGGAGAGCGAAGAAGGCGCTGATTGATTTGTCCATTAGTATGCTTGATGATAATAAGGATTCAAATGTTGCGCAGAGGAATCGGTCTTTCGGGAGGAATAATGGTGGTAGAGAGAAGGATCACAGCCATGGGAATAGTCATGGGAATAACAACTATCAACATCAGTCTTTGGGGCATTTTAGATCACTTTCGTGGAGTGTTTCTCGTACTTGGTCTGCTGCTAGACAACTCCAAGCAATTGGGAACAACATTAATCCTCCTAAAGCGAATGATCTGATTGCGACGAATGGTCTTGCGATGTCGGTGTATGTTATGAATTCAGTATTGTTGTTTGTTATGTGGGCTCTTGTGGCTGCTATTCCTTGTCAAGACCGTGGTTTGCAAGTGCATTTCACCATTCCAAGGAGCTACACTTGGGCTATTCCGTTGCTAGCGCTACACGATAGGATCTTGGAGGAGTCGAAGAAGCGCGAGAGAAAGAATGCTTGTGGCTTGCTTAGAGAGATTCAACAGATTGAGAAATCTGTTAGACAGATGAGTGAATTGGCTGATTCGGCGCAGTTTCCGTTGACAGAGGAGAAGGAAGTGGAAGTTAGGCAGAGAGTTCAAGAGGTGTCAAAGGTTTGTGATGCTTTGAAAGATGGACTCGATCCGTTGGAGCGCCAAGTGAGGGAAGTTTTCCATAGAATTGTGCGGAGCCGGACCGAAGGGCTCGACTCTCTTGGTAGTAGGCCAAACAATGCTGAGTAA 1110 0.4586 MPATDYQSSSPSSLTQFGRSILSFRREQEDLLSLKWIGKLLDCFLVCQEEFKAILYSHKRQASRSPLDRMVSDYFERSVKALDVCNAIRDGVEQIRLWQKLLEIVLYALDHERSIGEGQFRRAKKALIDLSISMLDDNKDSNVAQRNRSFGRNNGGREKDHSHGNSHGNNNYQHQSLGHFRSLSWSVSRTWSAARQLQAIGNNINPPKANDLIATNGLAMSVYVMNSVLLFVMWALVAAIPCQDRGLQVHFTIPRSYTWAIPLLALHDRILEESKKRERKNACGLLREIQQIEKSVRQMSELADSAQFPLTEEKEVEVRQRVQEVSKVCDALKDGLDPLERQVREVFHRIVRSRTEGLDSLGSRPNNAE 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02788 369 Pfam Protein ROH1-like 26 361 IPR008511 -
Vifa3g02788 369 PANTHER BPS1-LIKE PROTEIN 13 361 - -
Vifa3g02788 369 MobiDBLite consensus disorder prediction 143 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02788 Vifa-Chr3 773445831 773447036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02788 - - ccaj:109812538 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04711 1 735640943 735642103 Vifa3g02788 3 773445831 773447036 PCT