Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02700 ATGTGTCGTATGTGCCATTATTGCGGTGCAAGCTTGACGGAATCAAATGCTGACAACGAGAAACATGGAAATCAGATTAGTTTAAAGTTGAATGGGAAAGTTCCCTTAAAACATTGTAAATCTTGTGGAGGGAAGCTAGAGCGAGAAAACGTGAAATGGCATAGTACGAGTCCATTTGCGACACCGTATATCAGTCCAACTACATCGCTGTCAAGTACTGACAGCTGTGTGTCCACTTCCAGCGAATTTTCAGTGGATGCGAACTCATTTGACAGGAATAGCCGAGAAGATAGTATAGTTGAAGGCGATATGGAAAATCTTGATCATAAGTTCAACCTGAAATCACTGAATATGATGCAAAACGATACTCCAAGACTTGGGATACAGAAGGAGATCAATGACTATACTATGAGAGACGTGGAGATTACAGAAGGAGATAGCTTTCAAGACGCTAAAGCCGAAGAAAATGAATATTCTTTTCCCGATAATTTGAACAACCAAACTTGGGAACCGCCCGAGCCAGAAAACCCGCAAGATGAAATGGACAATAGCGTGGCTTGTAATGACGACGATGAAGAACAGGGCATCGAGATTGCAAACTGGGGCGAACCAACCTCTATGAGTAGTTCTAAGGATGAATTATGCGGGGGCTATAGGTTTAGAGAGGAAAGACGAGGAGAGTTGGTAAAAGTAATGAATGGGAAATTTAAGGCCCTTGTAGGCCAGCTTCTTAAATCTGTTGGAGTTTCCTCTTCTGATGAAGGTGATAAAAGTTGGGTAGACATAGTTACACATTTGTCTTGGGAAGCTGCTGCATTTTTGAAGCCTGATGGTATTGGAGGTAATGCAATGGATCCTGATGGGTTTGTTAAAGTGAAATGCATTGCAGCTGGTTCTCGCAGCCAAAGTCAACTATTCAAAGGTTCGGTCTTCAAGAAACATGCCGCTCACAAGCATATGCCAACTAAGTACACAAATCCAAGGTTGCTACTGATTAGGGGCATGCTTGGCCATGCTATGAATGAGCTGTCCTCATTTAGCTCCATGGCTCAGGAGAAAGGCTATCTGAAATCTAAAATGGATCTTATAAAAATATGCAATCCAAATGTTATATTAGTGGAGAAAACTGTTTCTCGTGATATACAAGAGGCAATTCTGGATAAGGGGATGACACTAGTACTTGATATGAAGCTTCATCGACTGGAAAGAGTTGCACGCTGCATTGGTTCACCAATTCTTTCATGTGATGATTTGGACAGCCAAAAACTAAGAATGTGTGATTCTATTTATTTTGAGAGATTTGTGGAGGAACATGAGGCTAACGGTGAAGGAGGAAAGAGGCCAACCAAGACCTTGATGTTCATTGAAGGATGTCCAACACGTTTGGGCTGTACGATTTTGTTGAAAGGAACACACAGTGATGAGCTAAAGAGAATCAAATGTGTTATGCGATGTGCAGTTATCATGGCATATAACTTAATCCTTGAAACCTCATTTCTTGTTGATCAGAAAGCAATGTTCTCTACCTTTCCTCCAGTTACTATGGCAGATATTTTGCCAATCAAACAAGAACCCAGCGATTCATCGTCTATTAATTCAAGTGTTCCGCAGACTCTTGAGCATTCAGATGAAACTGGAATAGTTAGTACTGATATTCCTATATATAATGGACTTCATGAAAAAAGCACCGATGGTTTAACTGTAGAATCTGAGGAGTTATCCCCATTTTCTTATGAACCATATAATCCAGCCGTGTTCACTGGATTCTCAGCGATTTCAACTTCTCTGAAGAAGGTAATGGGGGATAGTTTTCCCTTTGCATCTGCTACTTCTTACCAGTCTTTATCAGCATACCTTGGCTTCAATGGAAGGAAACCCGATGGCCTGGTTAACACTTCTGTTTCTATTGAAGAGTTTCCTGAGGCAGAAGAAAATACCAGGATTGAAGAAAGTAATGATTCCAATGAAGTAAGTTTACTTAGCGGTGGACAATCCCCATCCTTACCCGTGCACTTAGATGCCAATGGTGATATAAGTAAAGTTGATAGTGATAGAAAAGAACTCCAAAGTAAAGATGATATCAATGCAGTGTTGGATTCTCAGAGTATTTTGGTCTTGATGTCTAGCCGTAATGCCTCAAGAGGAACTGTATGCCAGCAAAGTCATTTTTCCCATATTATGTTCTACAAGAATTTTGACATCCCACTTGGAAAGTTTTTGCAGGATAACCTACTCAATCAGACAAGACTTTGTGGCACTTGTCAAGAATTGCCAGAAGCGCACCTTTATTATTATGCGCATCACAATAAACAGCTCACTATACAAGTGAAACAATTGGCAACTGGAGATTTTTTACCTGGGGAGGCAGAGAGGAAAATTTGGATGTGGAGCCGCTGTGGAAAATGCAAGTCTTGCTCTACAAAGAGAGTGTTGATATCCACCACTGCCCTTAGTTTATCATTTGGAAATTTTTTGGACCTTAGCCTTTCTCGTTATTCATCTAGCCACAAATTGAGCTGTGGCCATTCTCTTGATAGGGATTTTCTCCACTTCTTTGGACTAGGTTCCATGGTTGCAATGTTCAGATATTCTTCAGTTGCTACTTATACCGTGTCTATGCCTCCTCAAAAGCTAGAATTTGGTGGTTCTATAAAACAAGAGTGGCTTATGGAAGAGACCGATAAAGTGCACAAGAAAGGCATAACACTGTTCACAGAAATTGCGAACTGTTTGAAGACAGTAAAATTTGATGGATCAAATCCTAACCGAGGATCAAAAAGAGAGTTCTCCGAGGTTGAGAAGATGTTAAAGAATGAAAGAGAAGAGTTTGAGGTTTACATCAAGATTGTGGTTGCTAAGAAAGTTGATCCAGATCGGGCTGCCTTCAATCTTCTCAGTCTTAACCGATTGATGTGGGATCTTCTTATTGAATCCGTTGTGTGGGGTCAACGCTTGAAATCATTACGCTCACCTGAGAAAGTTGTGCAAGAGTATAGCTATTCGAAGGTGGAAGGTATTGCTGGTAGAGAAGTTGCATCTATAGGTAATTTTAGGGAAGATGGCAATGTGAATGGGGACACCCATGTAAAATTTATGTCAGAAACATCTGTGAAAGTAAATGAAATCTCAATAAAGGAAATCCCTATCAGTGGATCTCCTCTAGAGTGCAATGAACAGGGTGATCCATCTAAAACTTTTGATATCCCACAGAATGTGAAAATACAAACTGTTGATGGTTTGGGATCAAAGAGGTATTCTGACCCAAAGTTGGAATCGAGTTCAAATGTTTCCACTCAGTTTCCTTCGGCAAATGGTCATCTTCAAGTACATCAAAACTTTCCAGTTGCTATAAATATTAAACCTATTCGTCCAATCGCTGATTCAAAGGTGTTAAACCAGAGTGCTTCACTGCATTCACCTGTTTCCATATTGCAAGATTCGGATGAAGGGTTCTGGAAGCCATTTTCTGATATTCGGAAGATAGGCATAAGGGAAATTCAGAAAAGTTTCTTTCCAAAATTTGAATATCTTTGCAGCTCTATTTCCGAACACGTGCCCACAGCCAATCAATTCACCACTGAGGAAGGTCCAAGGTTGCACATTCCTCTCAAGACAGACAATCATGTCGTGTCTGACTTTGAGGGTGAACCATCAAGCATAATTGCTTGTGCACTGTCCTTGTTGAAAGACTCATCTGAGATGTCGGAAATTGATGGTGATGTGAAAGAAAGTGGGATAACTTCAAAATCTACAGATTCTTTGCACGACTCTCTAGATTCAGATTCTGCGCATTCTACTGGAAGCGTGTCTTCAGAAGAGTCACGATCATTTCGTGCTACAGAAAACCATAGCAAAGAAGTTCATCTGGGTTATGCAAAATCACTTGGGAGGGAAAAATATTCTGTGGTTTGTCATTATTATAAGCAGTTCCGTGCACTTAGAAATTGCTGTTGCCCATCTGAGATTGATTATATTGCTTCTTTAAGCCGTTGTATGAATTGGGATGCTAAAGGTGGAAAAAGCAAGTCTTTTTTTGCCAAAACACTTGATGAGAGGTTCATCATAAAGGAAATCAAGAAGACGGAACTTGAAGCATTTTTGGGATTCTCTTCTCTATATTTCAAACACATGAGAGAGTCATTTGAGTCTGGGAGCCAAACATGTCTAGCAAAAGTCTTGGGGATATATCAGGTTACTAGAAGACACATTAAAAGTGGAAAAGAGGTTAAACATGACCTCATGGTGATGGAAAATCTTACCTACAATCGAAATATTGTACGCCAGTATGATCTTAAAGGTGCTCTTTTTGAGCGGTATACTTCTGATGCTACTGGTGCTGAGGATGTTCTTTTGGATCAGAACTTTGTGGAAGACATGAACTCTTCCCCGTTATATGTCAGTCACAAAGCAAAGCGAGTTCTTCAGCGTGCTATTTGGAATGACACATCTTTTCTCAATTCAATCAATGTGATGGATTACTCCTTACTTGTGGGAGTTGATTCTCAGAAGCGCGAGCTTGTTTGCGGAATCATTGATTATCTCAGGCAGTATACCTGGGACAAGCATCTTGAGACATGGATGAAGTCTTCACTTGTAGTGCCCAAGAATCACATGCCAACTGTAATCTCTCCAAAAGAATACAAGAAGCGGTTTAGAAAGTTTATGTCTACATATTTTTTTAGTGTACCTGATCACTGGTGCTCTCAAAAGTCCCCTATTCCTTGCAAACTTTGTTGCTCAGGAAAAGAAGACCCTTTCCAAATGGTTTCTCTTCCTAAATCTTTTTAA 4788 0.4023 MCRMCHYCGASLTESNADNEKHGNQISLKLNGKVPLKHCKSCGGKLERENVKWHSTSPFATPYISPTTSLSSTDSCVSTSSEFSVDANSFDRNSREDSIVEGDMENLDHKFNLKSLNMMQNDTPRLGIQKEINDYTMRDVEITEGDSFQDAKAEENEYSFPDNLNNQTWEPPEPENPQDEMDNSVACNDDDEEQGIEIANWGEPTSMSSSKDELCGGYRFREERRGELVKVMNGKFKALVGQLLKSVGVSSSDEGDKSWVDIVTHLSWEAAAFLKPDGIGGNAMDPDGFVKVKCIAAGSRSQSQLFKGSVFKKHAAHKHMPTKYTNPRLLLIRGMLGHAMNELSSFSSMAQEKGYLKSKMDLIKICNPNVILVEKTVSRDIQEAILDKGMTLVLDMKLHRLERVARCIGSPILSCDDLDSQKLRMCDSIYFERFVEEHEANGEGGKRPTKTLMFIEGCPTRLGCTILLKGTHSDELKRIKCVMRCAVIMAYNLILETSFLVDQKAMFSTFPPVTMADILPIKQEPSDSSSINSSVPQTLEHSDETGIVSTDIPIYNGLHEKSTDGLTVESEELSPFSYEPYNPAVFTGFSAISTSLKKVMGDSFPFASATSYQSLSAYLGFNGRKPDGLVNTSVSIEEFPEAEENTRIEESNDSNEVSLLSGGQSPSLPVHLDANGDISKVDSDRKELQSKDDINAVLDSQSILVLMSSRNASRGTVCQQSHFSHIMFYKNFDIPLGKFLQDNLLNQTRLCGTCQELPEAHLYYYAHHNKQLTIQVKQLATGDFLPGEAERKIWMWSRCGKCKSCSTKRVLISTTALSLSFGNFLDLSLSRYSSSHKLSCGHSLDRDFLHFFGLGSMVAMFRYSSVATYTVSMPPQKLEFGGSIKQEWLMEETDKVHKKGITLFTEIANCLKTVKFDGSNPNRGSKREFSEVEKMLKNEREEFEVYIKIVVAKKVDPDRAAFNLLSLNRLMWDLLIESVVWGQRLKSLRSPEKVVQEYSYSKVEGIAGREVASIGNFREDGNVNGDTHVKFMSETSVKVNEISIKEIPISGSPLECNEQGDPSKTFDIPQNVKIQTVDGLGSKRYSDPKLESSSNVSTQFPSANGHLQVHQNFPVAINIKPIRPIADSKVLNQSASLHSPVSILQDSDEGFWKPFSDIRKIGIREIQKSFFPKFEYLCSSISEHVPTANQFTTEEGPRLHIPLKTDNHVVSDFEGEPSSIIACALSLLKDSSEMSEIDGDVKESGITSKSTDSLHDSLDSDSAHSTGSVSSEESRSFRATENHSKEVHLGYAKSLGREKYSVVCHYYKQFRALRNCCCPSEIDYIASLSRCMNWDAKGGKSKSFFAKTLDERFIIKEIKKTELEAFLGFSSLYFKHMRESFESGSQTCLAKVLGIYQVTRRHIKSGKEVKHDLMVMENLTYNRNIVRQYDLKGALFERYTSDATGAEDVLLDQNFVEDMNSSPLYVSHKAKRVLQRAIWNDTSFLNSINVMDYSLLVGVDSQKRELVCGIIDYLRQYTWDKHLETWMKSSLVVPKNHMPTVISPKEYKKRFRKFMSTYFFSVPDHWCSQKSPIPCKLCCSGKEDPFQMVSLPKSF 1595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02700 1595 Gene3D GroEL 301 470 IPR027409 -
Vifa3g02700 1595 MobiDBLite consensus disorder prediction 159 188 - -
Vifa3g02700 1595 Coils Coil 922 942 - -
Vifa3g02700 1595 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1246 1418 IPR027484 -
Vifa3g02700 1595 Gene3D - 1419 1560 - -
Vifa3g02700 1595 SUPERFAMILY GroEL apical domain-like 302 470 IPR027409 -
Vifa3g02700 1595 MobiDBLite consensus disorder prediction 1238 1281 - -
Vifa3g02700 1595 CDD PIPKc_PIKfyve 1299 1559 IPR044769 GO:0000285
Vifa3g02700 1595 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1420 1560 - -
Vifa3g02700 1595 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1337 1503 IPR002498 GO:0016307|GO:0046488
Vifa3g02700 1595 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 301 470 - -
Vifa3g02700 1595 FunFam Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D 1242 1418 - -
Vifa3g02700 1595 CDD Fab1_TCP 237 503 - -
Vifa3g02700 1595 SMART PIPK_2 1273 1560 IPR002498 GO:0016307|GO:0046488
Vifa3g02700 1595 MobiDBLite consensus disorder prediction 1260 1275 - -
Vifa3g02700 1595 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 5 1574 - -
Vifa3g02700 1595 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1238 1559 IPR002498 GO:0016307|GO:0046488
Vifa3g02700 1595 MobiDBLite consensus disorder prediction 159 173 - -
Vifa3g02700 1595 Pfam TCP-1/cpn60 chaperonin family 242 499 IPR002423 GO:0005524
Vifa3g02700 1595 MobiDBLite consensus disorder prediction 640 668 - -
Vifa3g02700 1595 SUPERFAMILY SAICAR synthase-like 1297 1560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02700 Vifa-Chr3 747707090 747716226 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02700 320 1569 Acyl Lipid Metabolism Gene Families AT1G34260 47.630 0.0 1076
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02700 K00921 - gmx:100809696 2283.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02700 3 747707090 747716226 Vifa3g02700 3 747707090 747716226 ECH