Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02697 ATGCCTCCAATTCCGAAGAACAACAACAACGCCCCTTTCTCCATTCCCACACTCTTCCTTTTCTTCGCCGTCATCTCCATTTTGACTCTCGCATTCTTCTTCTCTTCCTCCTCCACCACCACAACCATCTCACACCGTTCCCTCACTCTTCAACCCCTCACCTCTTCCAGCATCAATGTCTACGTCGCGGATCTTCCCAAATCCCTCAACTACGGCCTCCTCAACCGCTACTGGTCCCTCGATTCCGATTCCCGTCTCGGCAGTGACGCAGACCGTGAAATCCGATCCACCAATTTGGGTAAAACCCTAGAAATCCCACCGTATCCGGAGAACCCAATTATCAAACAGTATAGTGCGGAGTACTGGATCATGGGGGATCTTATCACTCCTCCTCAATTACGATCTGGGTCATTCGCAAAACCGGTTCTTGATGCACGTGACGCTGATGTGGTCTTTGTTCCTTTTTTCGCTACTCTTAGCGCTGAATTGCAATTGGGTACGGCTAAAGGAGTCTTCAGGAAGAAAGATGGGAACGAGGATTACCAGAGGCAGAGGGAGGTTATTGATTTTGTGAAGAAAACTCAAGCTTGGAATCGTTCCGGCGGTCGAGATCACGTGTTTGTTCTCACTGACCCGGTTGCAATGTGGCATGTGAAAGATGAGATTGCTCCAGCTGTTCTTCTTGTTGTGGATTTTGGTGGGTGGTATAGACTTGACTCAAAATCATCCAACTGTAGCTCCTCTGAAATGATCCAACACACTCAAGTTTCTGTAATTAAAGACGTGATTGTTCCGTACACACATCTGCTGCCAAGTTTGCACTTGTCAGAAAACAAGAAGCGCCACAACCTTCTTTATTTTAAAGGAGCCAAACATAGGCACCGGGGAGGCCTGGTTAGAGAGAAGTTGTGGGATCTATTGATCAATGAGCCTGGTGTAATAATGGAGGAAGGCTTCCCTAATGTGACTGGGCGAGAGCAATCAATACAAGTTTTTGTAGCAGTTGGTGATGCACTCAAGCCAAGCTGGCTAGTCAATCATCTTCAAAGCTTTTCAAAACAACAGAAAGACATGTTCCGCCAAAACATGGCTCGGGCACAGCCCATGTTTGTCTATGATAATGGTCATCCTGGTGGTATTGGCCCTCTACCTTTGGATGGTGCAGTGAATAATATATGGAAGAAAGTTCATCAAAAACTGCCAATGATAAAAGAAGCCATAATTCGAGAGAAAAGAAAACCACCTGGTGTGTTGGTTCCACGGCGATGTCAATGTACTTAG 1281 0.4645 MPPIPKNNNNAPFSIPTLFLFFAVISILTLAFFFSSSSTTTTISHRSLTLQPLTSSSINVYVADLPKSLNYGLLNRYWSLDSDSRLGSDADREIRSTNLGKTLEIPPYPENPIIKQYSAEYWIMGDLITPPQLRSGSFAKPVLDARDADVVFVPFFATLSAELQLGTAKGVFRKKDGNEDYQRQREVIDFVKKTQAWNRSGGRDHVFVLTDPVAMWHVKDEIAPAVLLVVDFGGWYRLDSKSSNCSSSEMIQHTQVSVIKDVIVPYTHLLPSLHLSENKKRHNLLYFKGAKHRHRGGLVREKLWDLLINEPGVIMEEGFPNVTGREQSIQVFVAVGDALKPSWLVNHLQSFSKQQKDMFRQNMARAQPMFVYDNGHPGGIGPLPLDGAVNNIWKKVHQKLPMIKEAIIREKRKPPGVLVPRRCQCT 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02697 426 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 56 309 IPR004263 GO:0006486|GO:0016757
Vifa3g02697 426 Pfam Exostosin family 56 327 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02697 Vifa-Chr3 746844105 746846847 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02697 - - adu:107467786 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02697 3 746844105 746846847 Vifa3g02697 3 746844105 746846847 ECH