Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02649 ATGAAGATGAGTGTTTCCACCTTCACTCATCTATCTTACTCTTCTCCCTCCATTTCCTCTATCTTCCATTCTCTTCCCTCTACCCTTATCTCCAATCCTTTCCCTTCCAAACTCGCCACTTCATCACCATACCCTCTCAAAAAGATCAAAGCCTTGGGAATTCACCAAACTAGTTCCACTTCACATGGAAGCAAACTTGATGCAGTCAAGAGTAGGATACTGCTCCAGATGTTTCAAAGGGCAATGCCAATGGAACCCCTTACAACCATTTTCAGACAACAATCCCAGATGAATGACTTTACATTGGAAAATCTTCAAGATAGGAAAAAGTCATCCAAATGGGTTGCAGCATTCTTGTTTGGACTAACTATATCAATTATTTCTCCCGATGTTTCATATGCAAGCAGCTCAGTAAAGATAAATGAGATGTATCAGGTTGGGGAGTTGTTTGACTTAGGAATCCAATTAATATATTTGCTATTGTTGTTGGGCTTGCTCGGGGCTGGAACTTACTATGTGATTCGCCAAGTTCTTGTTCGCAGAGAGCTTGACCTTTCTGCCAAAGAGTTGCAAGAGCAAGTCAGAAGTGGTGATGCAAATGCGACTGAGCTGTTTGAACTTGGTGCAGTGATGCTGCGGAGGAAGTTTTACCCAGCTGCTACCAAGTTTTTACTTCAAGCAATTGATAAATGGGATGGAGAAAATCAGGATCTTGCCCAGGTTTACAATGCACTTGGTGTCAGTTATGTCCGTGACGGGAAGCTAGAGAAAGGAGTTGCGCAGTTTGAGACAGCTGTGAAGATTCAACCAGGCTATGTCACGGCATGGAACAATCTTGGTGATGCTCTTGAAAGTAAAAAAGAATATGTGTCGGCTCTAAAGGCATTTGAAGAAGTTCTTCTATTTGATCCTAACAACAAGATTGCGCGGCCCAGGAGAGATGCTTTGAAGGGACTTGTTGGAATGTCCGAAGGAGTTACTATCAGATATAGAGAGAAGAAATGA 1005 0.4239 MKMSVSTFTHLSYSSPSISSIFHSLPSTLISNPFPSKLATSSPYPLKKIKALGIHQTSSTSHGSKLDAVKSRILLQMFQRAMPMEPLTTIFRQQSQMNDFTLENLQDRKKSSKWVAAFLFGLTISIISPDVSYASSSVKINEMYQVGELFDLGIQLIYLLLLLGLLGAGTYYVIRQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGENQDLAQVYNALGVSYVRDGKLEKGVAQFETAVKIQPGYVTAWNNLGDALESKKEYVSALKAFEEVLLFDPNNKIARPRRDALKGLVGMSEGVTIRYREKK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02649 334 SMART tpr_5 239 272 IPR019734 GO:0005515
Vifa3g02649 334 SMART tpr_5 273 306 IPR019734 GO:0005515
Vifa3g02649 334 Gene3D Tetratricopeptide repeat domain 176 320 IPR011990 GO:0005515
Vifa3g02649 334 ProSiteProfiles TPR repeat profile. 239 272 IPR019734 GO:0005515
Vifa3g02649 334 ProSiteProfiles TPR repeat profile. 273 306 IPR019734 GO:0005515
Vifa3g02649 334 SUPERFAMILY TPR-like 197 310 IPR011990 GO:0005515
Vifa3g02649 334 Pfam Tetratricopeptide repeat 244 303 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02649 - - psat:127098590 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02649 3 731601826 731604849 Vifa3g02649 3 731601826 731604849 ECH