Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02646 ATGGCTTCAATTCCATATTCAGATCAAAACCCTAACCAACAAGAAAACTCCATAATTCCAGTGTTAACAGTTTTCAAGAACAAATCGATCATCAAGAACATCTGCATCATTCTCAACGACGACAACGAAGACGATCACATCATTCTCATCGGTCGTCACCCAACCTGCAACATTGTTCTCACTCACCCTAGCATCAGCCGTTTCCATCTTCAGATTCGCTTCACTCCCTCTTCAAAATCCATTTCGCTTCTCGATATATCTTCTGTGCACGGAACGTGGGTGAGCGGTAGGAAGCTCGAGAGTGGCGTCAGCGTTGAATTGAAGGGAGGTGATAGCTTTCGACTTGGGGCTTCCAGTAGGGTTTACCTTCTTCGCTTTGTCTCCCAATTCGACGCAAATGCGATAAAGAACATTGGTTCTTTATCTTGTGATGATGATGAAATTAAGAGCCCGTTAGAAACATTTGACGATGAGAATGACTCCGTTGGAACTGAGACATCATGTTGTGATGGTGAGGATCAACCGGGTGAATCTCAAATCTGTTTTCTATCTCCACCTTATGTACAATCAGTGGATGAAGCAGATAGCAGACAAGTAATTAAAGCTTGTCCCGAAGTAGAGGTGACGGGAGAGACTAGTTTGCTTTGCACATTGAAGGAATGTTTTAAACACACCTTATGTAACCCAGTTGTGGAAGCAAACAAATTGCACCAACAATCTTCTGCAGAAAAGAAGTGGATTGATCCTGAAGCATCACTTAATGAAAAATGTGGTGCTGCAGTGGATGTGATACCTAAAGAATCTGATTTTGAGGGTGCATTCAAAGATAGTGACAAGATTGGAGATATTTTAACTACAGGAGCAAACTTCTTCAATTCTGAGGACATGCCTGATTCTGAATCTCATCAAACCAATACTGATGAGGAAGTTTCTGTGGAATCACTCTCTGATGGGGAATCTTTTGATGAAATAGTTAAAAATGTGGACCTTTCATCATCTGATGAAAATGGTGTTGTTGCTGTGAATGTAAAACCCAGAGAGCAGAAATTAGAATTCTTCTTTGAAGAAAATGCCAGAATTGACAATATTTTAACTAGTGTATCAAGTCTTTTCATTTCTGCAAACAAGTCTTCACTACTTGAGGAAGCAAATCCTGTAACCAATTTTCAACAAAACAAGATTGTTGAAGAAGTTAATGTCGATTCACTGTCTGATGGAGAAAATGAAAATAATTGTGACACAGAGTTGCAGGCATACCAGAATTTTAAACCTTGTGATGAAGGTAACTCACTGGAGCAAACAGTTGAAGTTACTGTGAAATCCTTTCAAACAGAGTCACTGAATCCTTCAGTAGCTCAGGAGGCTGATTTAGATATTACAGACAAGGAGAATAGAACCCCGCAATCTCTCGTTGCTGTGGCTGGATGCTTTGATTTGGACTATGAAAGCTGTGTAGTAGACTCAGCACAGAGAAGTTCTCCTTGTGATGAAGAAGGTAACTCACTTGATGAAACAGTTGAAGATACTGTGAAATCCTTTCAAACAGAGTCACTTAATCCTTCAGTAGCTCAGGGGGCTGATTTAGATATTACAGACAAGGAGAATAGAACCCCACAATCTCTCGTTGCTGTGGCTGGATGCTTTGATTTAGACTATGAAAGCTGTGTAGAAGACTCAGCACAGAGAAGCTCAACATTTGCTTGTGATAAGGCTGTGAGTGCGCCTCAGAATCAAACCAGGAAGAGCAGATTATTGAACACACCTAATGTTGATACTAAATTTGTAATGAGTAATTTGAGGGATATCAGTGTCATAAATAAACCAATGCGAAAGGATCTTTTCTCTGTCTCGGATGAAGAAGAAATGTGCACTCCAACTAAGGAAAACCTAGAAGATAGTAAAAATTCCGAGTCACGGATGTCAAAGAATTTTTTGAAGGCTAGTTTTAGTCCCAACTTCTATTCCGCGGAAAGAAGTACAAGTGCCTTTTCAAACAAAGAGAACCTGACTCCAAGAGAAGCTCAACAATGGCAGTCAGAGAGAAAGCCTCTTGAGTGTCATGATACTGCGGGGTTAAGAAAAAAGAGAGCGGAGCGGACACCCTTACGGTTACTAATGAATTCTGCAGACAATCACAATTCGGCAAACTCAAGTCCTGTTTATAGTCCTTTTTCTGCAAAAGAGAACCTGACTCCAAGAGAAGCTCAACAATGGCAGTCAGAGAGAAAGCCTCTTGAGTGTCATGATACTGCGGGGTTAAGAAAAAAGAGAGCGGAGCGGACACCCTTACGGTTACTAATGAATTCTGCAGACAATCACAATTCGGCAAACTCAAGTCCTGTTTATAGTCCTTTTTCTGCAAAAGAGAACCTGACTCCAAGGGGAGCCCGACAATGGCAGTCAGAGAGAAAGCCTCTGGAGTGTCATGATACTGCAGGGTTAAGAAAAAAGAGAGTGGAGCGCACACCCTTACAGTCACTAATGAGTTCTGGAAGCAATCACAATTCAGCAAACTCAAGTCCTTTTTATAGTCCTTTTTCTGTTGCAAAAGAGATACCCTTACAGTCACTAGGGAGATCTGGAGGCAATCGCAGTTTGGCAAACTCAAGTCCTTTTAATAGTCCATTTTCTGCTGCAAAATCCATTCTAGGCGTCACTGCTAGAACCAGTAGTTCTAGAACCAGTAATTCGAGACACATTTCAGACAAGCACAGTGAACCTTCTCCTGTGAGTGAAGAGCGAAAGAGAAGCTGGGATATGGTTGTAGACACTGCTTCTCTTCTGAACAAGGAGTCAAGAAAGGCTTTGCAGCTTCTACAAGGTCTCAAGGGGACTCGGTTAATCATTCCACAATCAGTCATAAGAGAATTGGGCAGCATGAAGCAACAGATTGGAGTTTTTAGAAGGATTCCAGAGGCTACTAAGGCCTTGGAATGGATTGAAGAATGCTTAGGAAAGACAAAGTGGTGGATTCATATCCTTGACTGTGCTTTTCCTATTATTGAAGATCAGATCCTTGACTGTGCTCTTCAATATAGAAGCAAAGATAATGCTGGACAACTTGTCCTTCTTAGTGATGATATCACCTTGAAAATCAAATCCATGGCGAAGGGACTGCTATGTGAGACAGTGGAGCAATTTCGTCGGAGTTTAGTGAACCCTTTCTCTGAGAGGTTTATGTGGGCTAACAGCGCTCCTAGGGGACTGACTTGGTCTTGCCAAGATGATGTGGTTTTAAGGGAGAAATATTGCCGTTTCCCATCAAAGGCTGGTTTGAAGGTGCTTGTCACTTAA 3294 0.4159 MASIPYSDQNPNQQENSIIPVLTVFKNKSIIKNICIILNDDNEDDHIILIGRHPTCNIVLTHPSISRFHLQIRFTPSSKSISLLDISSVHGTWVSGRKLESGVSVELKGGDSFRLGASSRVYLLRFVSQFDANAIKNIGSLSCDDDEIKSPLETFDDENDSVGTETSCCDGEDQPGESQICFLSPPYVQSVDEADSRQVIKACPEVEVTGETSLLCTLKECFKHTLCNPVVEANKLHQQSSAEKKWIDPEASLNEKCGAAVDVIPKESDFEGAFKDSDKIGDILTTGANFFNSEDMPDSESHQTNTDEEVSVESLSDGESFDEIVKNVDLSSSDENGVVAVNVKPREQKLEFFFEENARIDNILTSVSSLFISANKSSLLEEANPVTNFQQNKIVEEVNVDSLSDGENENNCDTELQAYQNFKPCDEGNSLEQTVEVTVKSFQTESLNPSVAQEADLDITDKENRTPQSLVAVAGCFDLDYESCVVDSAQRSSPCDEEGNSLDETVEDTVKSFQTESLNPSVAQGADLDITDKENRTPQSLVAVAGCFDLDYESCVEDSAQRSSTFACDKAVSAPQNQTRKSRLLNTPNVDTKFVMSNLRDISVINKPMRKDLFSVSDEEEMCTPTKENLEDSKNSESRMSKNFLKASFSPNFYSAERSTSAFSNKENLTPREAQQWQSERKPLECHDTAGLRKKRAERTPLRLLMNSADNHNSANSSPVYSPFSAKENLTPREAQQWQSERKPLECHDTAGLRKKRAERTPLRLLMNSADNHNSANSSPVYSPFSAKENLTPRGARQWQSERKPLECHDTAGLRKKRVERTPLQSLMSSGSNHNSANSSPFYSPFSVAKEIPLQSLGRSGGNRSLANSSPFNSPFSAAKSILGVTARTSSSRTSNSRHISDKHSEPSPVSEERKRSWDMVVDTASLLNKESRKALQLLQGLKGTRLIIPQSVIRELGSMKQQIGVFRRIPEATKALEWIEECLGKTKWWIHILDCAFPIIEDQILDCALQYRSKDNAGQLVLLSDDITLKIKSMAKGLLCETVEQFRRSLVNPFSERFMWANSAPRGLTWSCQDDVVLREKYCRFPSKAGLKVLVT 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02646 1097 PANTHER TRANSMEMBRANE PROTEIN 18 786 1095 - -
Vifa3g02646 1097 MobiDBLite consensus disorder prediction 618 638 - -
Vifa3g02646 1097 MobiDBLite consensus disorder prediction 887 916 - -
Vifa3g02646 1097 Gene3D - 2 128 - -
Vifa3g02646 1097 MobiDBLite consensus disorder prediction 897 916 - -
Vifa3g02646 1097 MobiDBLite consensus disorder prediction 660 677 - -
Vifa3g02646 1097 MobiDBLite consensus disorder prediction 660 682 - -
Vifa3g02646 1097 SMART FHA_2 47 99 IPR000253 GO:0005515
Vifa3g02646 1097 MobiDBLite consensus disorder prediction 709 729 - -
Vifa3g02646 1097 Pfam PIN domain 920 1044 IPR002716 -
Vifa3g02646 1097 Pfam FHA domain 49 116 IPR000253 GO:0005515
Vifa3g02646 1097 Gene3D - 915 1051 - -
Vifa3g02646 1097 ProSiteProfiles Forkhead-associated (FHA) domain profile. 48 99 IPR000253 GO:0005515
Vifa3g02646 1097 MobiDBLite consensus disorder prediction 292 316 - -
Vifa3g02646 1097 SUPERFAMILY SMAD/FHA domain 43 131 IPR008984 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02646 - - psat:127098587 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02646 3 729816875 729821475 Vifa3g02646 3 729816875 729821475 ECH