Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01972 ATGGACGCTGATTCCTCTTGGACTGCTCGTCTCTCTTCCGCATCCAGACGGTATCAAGCCGCTCTTCAATCTCGATCAGATATGTTCATGGGTTTTGATGAAAACGATGTGGAAGAAGATATAAGGGAAGAGTTTCTGTGTCCGTTTTGTTCTGAGTATTTTGATATTGTTGGATTGTGCTGCCATATTGATGAAGAGCATCCAATGGAAGCAAAAAATGGGCGCAAGAGGAAATCACGTAAAGGTGGATCTTATTCAACGCTTTCGTTATTGAGGAAGGAGCTAAGAGAAGGAAATTTGCAATCCCTTTTTGGTGGGTCTCAATGTATAGTGTCCTCGTCTAATGCAGCACCTGATCCGCTGCTGTCTTCATTCATATCGCCTTTAAGTAATGAATCTATGAGTTCTCAGTCTCACACACATACTGAGACAAGATCATCCAAGAAAGGCTCGGACGAGACTGTGCCAAAAAGCCATGTGGAGACACCAACCATGTCAGTTAAAGATAAGGAGGAGAAGACGAAAAGATGCGAGTTTATTCAAGGGCTGTTGATGTCCACCATACTTGATGACGATTTATGA 582 0.4296 MDADSSWTARLSSASRRYQAALQSRSDMFMGFDENDVEEDIREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGRKRKSRKGGSYSTLSLLRKELREGNLQSLFGGSQCIVSSSNAAPDPLLSSFISPLSNESMSSQSHTHTETRSSKKGSDETVPKSHVETPTMSVKDKEEKTKRCEFIQGLLMSTILDDDL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01972 193 Coils Coil 190 193 - -
Vifa3g01972 193 MobiDBLite consensus disorder prediction 142 156 - -
Vifa3g01972 193 Pfam Stress-induced protein Di19, C-terminal 88 188 IPR027935 -
Vifa3g01972 193 MobiDBLite consensus disorder prediction 127 172 - -
Vifa3g01972 193 MobiDBLite consensus disorder prediction 127 141 - -
Vifa3g01972 193 PANTHER PROTEIN DEHYDRATION-INDUCED 19 30 190 IPR033347 -
Vifa3g01972 193 Pfam Drought induced 19 protein (Di19), zinc-binding 43 73 IPR008598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01972 Vifa-Chr3 495969612 495972110 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01972 - - gmx:100795155 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01972 3 495969612 495972110 Vifa3g01972 3 495969612 495972110 ECH