Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01663 ATGTCTGGCTCAAGCGATGAGTTGGTGATATCATTTGGTGAGATGCTTATAGATTTTGTTCCGGACACATCTGGTGTATCTTTGGCTGAGTCTCTTGGTTTCCTCAAAGCTCCTGGCGGTGCTCCTGCAAATGTGGCTTGTGCCATAGCCAAACTTGGTGGCAATGCTGCTTTCATTGGCAAGGTGGGGGAGGATGAATTTGGAAGGATGCTAGCTAACATATTGAAGAACAATGGTGTGAATACAGACGGTGTTCTTTTTGACAAAGAGGCTAGAACTGCATTGGCTTTTGTAACCTTAAGGAAAGATGGAGAGAGGGAGTTCATGTTTTATAGAAACCCTAGTGCTGATATGTTACTAACAGAATCTGAACTGAAAATGGATTTGATCAAGAAGGCCAAGATATTCCACTATGGATCTATCAGTCTTATTACTGAGCCATGCAGATCTGCTCACATGGCTGCCATGAAAGCTGCTAGAGAAGCTGGTGCTTTGTTGTCCTATGATCCAAATGTCAGGCTACCTTTATGGCCTTCTGCTGAGGCTGCTAGATCTGGAATCAAAAGTATTTGGCTTGAGGCTGATTTCATCAAGGTGAGTGATGATGAAGTTGAATTTCTTACACAAAAAGATCCTCAAAATGAAGATGTTATCATGTCTTTGTGGCATGACAAGTTGAAGCTGCTTCTTATCACTGATGGAGAGAAGGGTTGCAGATATGTCACTAAGAATTTTAAAGGAAAGGTAAGTGGATTCGCAGTGAAGACAATTGACACAACTGGTGCTGGTGATGCTTTTGTTGGTGCACTTCTCACAGCTGTGGCTAGAGACGCTTCCATATTTGATAATGAAGCAAAACTGAAAGAGGCCTTGACATTTTCAAATGCTTGTGGAGCAATATGTACAACACAGAAGGGAGCCATTCCCGCACTTCCAACTGTTGAAGACGCTAAGAAACTCATTTCCAGCTCTAATGCCAATTAA 984 0.4238 MSGSSDELVISFGEMLIDFVPDTSGVSLAESLGFLKAPGGAPANVACAIAKLGGNAAFIGKVGEDEFGRMLANILKNNGVNTDGVLFDKEARTALAFVTLRKDGEREFMFYRNPSADMLLTESELKMDLIKKAKIFHYGSISLITEPCRSAHMAAMKAAREAGALLSYDPNVRLPLWPSAEAARSGIKSIWLEADFIKVSDDEVEFLTQKDPQNEDVIMSLWHDKLKLLLITDGEKGCRYVTKNFKGKVSGFAVKTIDTTGAGDAFVGALLTAVARDASIFDNEAKLKEALTFSNACGAICTTQKGAIPALPTVEDAKKLISSSNAN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01663 327 SUPERFAMILY Ribokinase-like 9 319 IPR029056 -
Vifa3g01663 327 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 39 63 IPR002173 GO:0016301
Vifa3g01663 327 Gene3D - 5 327 IPR029056 -
Vifa3g01663 327 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 258 271 IPR002173 GO:0016301
Vifa3g01663 327 FunFam Probable fructokinase-2 6 325 - -
Vifa3g01663 327 CDD bac_FRK 8 308 - -
Vifa3g01663 327 Pfam pfkB family carbohydrate kinase 7 313 IPR011611 -
Vifa3g01663 327 PANTHER HEXOKINASE FAMILY MEMBER 8 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01663 Vifa-Chr3 429707746 429710180 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01663 K00847 - gmx:100791294 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01663 3 429707746 429710180 Vifa3g01663 3 429707746 429710180 ECH