Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01660 ATGGCATGTTGGATGGCAACAACGCCACTCTCACTCTGTCTCTCACCGACCCTCTCCCCCTTCAAATTCAAGTGTTACGCGACACACCCACAGCCACAGTGTTCTTCAGTGCACAACGACGACCTCCAAGCTCTCTTACAGATTCTTCCATCCGATTTGCATCACAATCTCCTCAATCAACCTAACCGCACTCATCTCTTAGAGGTTATATTGGATTTAGGCCGGTTTCCCGAAGCACGTTATCTCGGAAAACACGGAAACCACTATCTAAGAAATTCTGAGGTAACAGTGAAAGAGCTGGAATATGCTTATGGAGCTGTTGGAGAGTTTGGGAATGATAATAGAGCTGGTATTGAGGGTACTTTGCATAGAATATCTGCAATACGGAGTAGAAATGGTGGTATTGTTGGTTTGACATGTCGAATTGGGAGGGCGGTCACGGGACATATTGATATGGTTTATGATCTGCTTCAATATGGCAAGAGCATTTTGTTTGTTGGAAGGCCTGGGGTTGGCAAGACTACTGTTATGAGAGAGATTGCCCGTGTAATGTCAGATGAATTTCATAAAAGAGTGGTGATTGTCGATACCAGTAATGAAATTGGAGGTGATGGAAATATTCCTCATGCAGCAATAGGCGGTGCACGAAGAATGCAGGTACCCATGCCATCAATGCAACATAGTATGATGATTGAGGCAGTAGAAAATCACATGCCTGAGGTGATTATAGTAGACGAGATTGGCACAGAAGCTGAAGCTCATGCTTGCCGGTCGATTGCTGAGCGAGGTATCATGCTTATAGGAACTGCTCATGGTCAGCAGATTGAGAATGTCATGAAGAATCCTACTCTCTGTGACCTGATTGGCGGAATTGAAAGTGTTACTCTGGGAGATGCAGAAGCCAGAGCAAGAAAATGTCAGAAGACAATTCTTGAGAGGAAAGGTCCTCCAACATTTAATTTCTTGATTGAGATGAGAGATAGACACTACTGGCTTACACATCAGACCGACAAAAGTGTAGATATGTTGCTTCGAGGCAAGAGTCCACAAGTTGAGGTACGCAAAAGAGATGAAAAATGCAAGGTTGTGATCGAAAAATCTAAAGCATATGATAAATGCCAAATTTGA 1128 0.4362 MACWMATTPLSLCLSPTLSPFKFKCYATHPQPQCSSVHNDDLQALLQILPSDLHHNLLNQPNRTHLLEVILDLGRFPEARYLGKHGNHYLRNSEVTVKELEYAYGAVGEFGNDNRAGIEGTLHRISAIRSRNGGIVGLTCRIGRAVTGHIDMVYDLLQYGKSILFVGRPGVGKTTVMREIARVMSDEFHKRVVIVDTSNEIGGDGNIPHAAIGGARRMQVPMPSMQHSMMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGIMLIGTAHGQQIENVMKNPTLCDLIGGIESVTLGDAEARARKCQKTILERKGPPTFNFLIEMRDRHYWLTHQTDKSVDMLLRGKSPQVEVRKRDEKCKVVIEKSKAYDKCQI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01660 375 SMART AAA_5 159 315 IPR003593 GO:0016887
Vifa3g01660 375 PANTHER KINASE-RELATED 38 357 - -
Vifa3g01660 375 Gene3D - 141 290 IPR027417 -
Vifa3g01660 375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 294 IPR027417 -
Vifa3g01660 375 Pfam Sporulation stage III, protein AA 140 289 IPR045735 -
Vifa3g01660 375 CDD AAA 154 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01660 Vifa-Chr3 429471689 429474478 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01660 - - gmx:100817880 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01660 3 429471689 429474478 Vifa3g01660 3 429471689 429474478 ECH