Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01659 ATGGCTTGTTGGTCTGCAGAAAATGCCACAAAGGCCTATCTTAGCACTTTAAAAATGGGTCAAAAAGCCAAAGAACCAAACGTAGCTGAATTTATATCAGCACTCGCAGCAGGAAACAATGCACAAATGATGATTGTAGCATGTGCTACTGTTGCAGATTCCACTACACTGGCTTTAATAGCTGCTGCTAATCAAACTGGTGGAAAAGTGATTTGTATTGTCCCTAACCATAAAGTTTTAAAAGCATCCAAACATGTCTTAGGAAAAGCTTCTCATCAAGTGGAGTTCATAGTTGGAGAAGCTCAAGAAGTGCTTGTGTTGGAAGAATATGAAGGAGCTGATTTTTTGCTTATTGACTGCAACATTGAAAACCATGAAGAGATTTTGAAGGCAATTGAGGAGGGTAGAAAGGTAAATGACGGTGCTATTGTTGTAGGGTATAATGCATTTAGTTGCAAAGGGTCATGGTTGTCAAGTGGATCCAAGACTCAGCTTTTGCCTATTGGAGAAGGGCTTTTGGTGACTAGATTTGGGATGGTTGAGAATAGTCCAAAATATGGAACAAGTAGAACAATGGGGAAGGTTAAAAGTCATTGGGTGGTAAAGGTTGATAAATGTACTGGTGAGGAACATGTGTTTAGGGTTAGATCTCCTCACGGAAAAGTTGTTCATGCTTGA 678 0.3982 MACWSAENATKAYLSTLKMGQKAKEPNVAEFISALAAGNNAQMMIVACATVADSTTLALIAAANQTGGKVICIVPNHKVLKASKHVLGKASHQVEFIVGEAQEVLVLEEYEGADFLLIDCNIENHEEILKAIEEGRKVNDGAIVVGYNAFSCKGSWLSSGSKTQLLPIGEGLLVTRFGMVENSPKYGTSRTMGKVKSHWVVKVDKCTGEEHVFRVRSPHGKVVHA 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01659 225 PANTHER DUF1442 FAMILY PROTEIN 3 214 IPR009902 -
Vifa3g01659 225 Pfam Protein of unknown function (DUF1442) 3 214 IPR009902 -
Vifa3g01659 225 Gene3D Vaccinia Virus protein VP39 5 178 IPR029063 -
Vifa3g01659 225 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 55 152 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01659 Vifa-Chr3 429158888 429159695 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01659 - - gmx:100775961 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01659 3 429158888 429159695 Vifa3g01659 3 429158888 429159695 ECH
Vifa1g03938 1 604526325 604527064 Vifa3g01659 3 429158888 429159695 PCT