Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00344 ATGTTGTCATCACCCGTTCTTGTCTCCTCAGCTCTCATCCTCTCTCTCCTCCTCATCCTCTTCTTCTCCCAACAAATCATCTTCCAAATTTACTCCCCTTTCTCCTCCTCCTCATCTTCCTCCGCCGTCACCGCCGCCGACCTCTCCCTCTTTCACCGCGCCACCCACACAACAAACCACCTATCCACCCTCACAAACCCTAAACCCAAAATCGCTTTCCTCTTCCTCACTAACTCAAACCTCTCCTTCGCACCTTTATGGGAAAAATTCTTCGCCGGTAACAACCACCTCTTCAACATCTACGTCCACGCCGACCCCACTTCCTCCGTCCTCTCACCCGGCGGAGTTTTCCAAAACCGTTTCATCCCTTCTCAAATAACCCAACGCGCTTCCCCAACACTCATCTCCGCCTCTCGACGTCTCTTAGCGACCGCCCTCTTAGATGATCCGCTCAACCAATACTTTACCTTAATCTCTCAACACTGTATTCCGCTTTTGTCGTTTCGATTCGTTTATAAATCTCTTTTTACAAATCAGTTAAAGTTATTAGAGAGTTTCGTCAGCTATAATAACTTTACATACCCCAGCTTCATTGAGATTCTCTCCGACGATCCCAATCTCAACGAAAGGTATAATGCTCGCGGTGAGAATGCAATGTTGCCTGAAATTGTGTTCGAGGATTTTCGGGTGGGTTCGCAGTTCTTTACCTTGAACAGAAAACATGCAAAGTTTGTGGTGGGAGAACAAAAACTATGGAAGAAATTTCTGATTCCTTGTATAAATGTGTATTCATGTTATCCAGAAGAACATTACTTTCCAACTCTTTTGTCAATGGAGGATCCGAATGGGTGCACTGGTTTTACACTCACTAGAGTTAACTGGACTGATTGTTGGGATGGACATCCTCATCTTTATACTCCGGATGAGGTTTCTCTGGAGCTTGTTCATCACCTGAGGCGATCCAATTCAAGCTACTCGTATTTCTTTGCAAGGAAATTCTCGCCGGAATGTCTTGGGCCTTTGATGGATATAGCTGACGAAGTGATTTTCAAGGATTGA 1059 0.4542 MLSSPVLVSSALILSLLLILFFSQQIIFQIYSPFSSSSSSSAVTAADLSLFHRATHTTNHLSTLTNPKPKIAFLFLTNSNLSFAPLWEKFFAGNNHLFNIYVHADPTSSVLSPGGVFQNRFIPSQITQRASPTLISASRRLLATALLDDPLNQYFTLISQHCIPLLSFRFVYKSLFTNQLKLLESFVSYNNFTYPSFIEILSDDPNLNERYNARGENAMLPEIVFEDFRVGSQFFTLNRKHAKFVVGEQKLWKKFLIPCINVYSCYPEEHYFPTLLSMEDPNGCTGFTLTRVNWTDCWDGHPHLYTPDEVSLELVHHLRRSNSSYSYFFARKFSPECLGPLMDIADEVIFKD 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00344 352 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 26 343 IPR044174 GO:0016757
Vifa3g00344 352 Pfam Core-2/I-Branching enzyme 71 318 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00344 Vifa-Chr3 43774212 43775270 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00344 - - lja:Lj6g3v0144920.1 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g00344 3 43774212 43775270 Vifa3g00344 3 43774212 43775270 ECH