Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05763 ATGGATTTTTTGAAGATTAAAAAGAAGTTTAGAAAATCTCAGAAAGGAGGTGTAGAGAAAGATTTGGTAGACAAGGCAGTACCGGAGCCTGAGGAACCGAAGACTAATGCTGGTGATTCGGATCAGTATAAATCAGAAAATGCAGATTCTGCTGGTGATGTTGAGGAGGATGACGATGATTTTATTACCAATGAGGTGAAGAGGAGGCTCAAGGAATTGAGAAGAAACAGTTTTATGGTTTTGATTCCAGAAGAAGATTCGTGTCTGGAGGAAGGGGAGGATGAAGAGGAAGAGGGAGAGACGGGTTCTAATGAATGGAGGGATGTGGAGGCAGAAGGTCAGCAGTGGTGGCGAGGCTTTGATGCTGTTTTTGAAAAGTACTGTGAAAGAATGCTGTTCTTTGATCGGATGTGCGGGCAGCATCTTAGTGAAATCGGAAAAGGTTCTCAGAACACTCCAACTCCATCTCCAAGATCTACTACAGCAAAGAAACTGGTCTCTCCCATGCGGTGTCTTTCCTTGAAAAGGTTTGAAGAACCAGATGATGAGTTTGAACATCTTCAACAGCCTGAAAATTGTCCATACTTGGATATTGAAACAGCGTATATAGGTCAAATTTGCTTGACTTGGGAGGCACTTCATTGTCAGTACTCTCATATGAGTTATAAGATATCTTGGCAACATGAAAATCCTACCTGTTATAACCGTAGTGCACAGGAGTTTCAACAGTTCCAAGTTCTATTGCAGAGGTTTATTGAAAATGAACCTTTCGAGCAAGGACTTCGACCTGAAATTTATGCTCGCACAAGGAACACTTTGCCTAAACTGCTTCAGGTTCCTAATATACGAGGTTCAGATAATGAATTAACAGATGAGTCAGATATGAGAGTTCTTGCTCCAGATCTGATCAGGATAATCGAAAACTCTATCCTTACTTTCCACCTTTTCCTGAAAAGGGACAAGAAGAAGTCAAGTGGTGTTATCAACCTGTTTGGAAACCAGAACCAGCTTGCAACTCCTCTACAACAGGTTCAGTATACTCTTGAGAAGAAAGTGGTGAAACTGAAGGAACTGCGAAAAAGGAAGAAGGGTTGGAGAAAAAGTTCTTGGCCACAAAAGCACGAGGACATTCAACTATTGCTTGGTCTAATTGACGTGAAAATCCTATCAAGGGTTCTTAGAATGACAAGGATGACAAGAGAACAACTGTTTTGGTGTGAAGAAAAGATGAAAAAACTAGATTTATCAAATAGTAAGTTAGAGAGGGATCCATGTCCCATTCTCTTCCCTTGCTAA 1296 0.4097 MDFLKIKKKFRKSQKGGVEKDLVDKAVPEPEEPKTNAGDSDQYKSENADSAGDVEEDDDDFITNEVKRRLKELRRNSFMVLIPEEDSCLEEGEDEEEEGETGSNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMCGQHLSEIGKGSQNTPTPSPRSTTAKKLVSPMRCLSLKRFEEPDDEFEHLQQPENCPYLDIETAYIGQICLTWEALHCQYSHMSYKISWQHENPTCYNRSAQEFQQFQVLLQRFIENEPFEQGLRPEIYARTRNTLPKLLQVPNIRGSDNELTDESDMRVLAPDLIRIIENSILTFHLFLKRDKKKSSGVINLFGNQNQLATPLQQVQYTLEKKVVKLKELRKRKKGWRKSSWPQKHEDIQLLLGLIDVKILSRVLRMTRMTREQLFWCEEKMKKLDLSNSKLERDPCPILFPC 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05763 431 Pfam Protein of unknown function (DUF1666) 197 430 IPR012870 -
Vifa2g05763 431 MobiDBLite consensus disorder prediction 11 62 - -
Vifa2g05763 431 Coils Coil 341 361 - -
Vifa2g05763 431 MobiDBLite consensus disorder prediction 86 103 - -
Vifa2g05763 431 PANTHER DNA LIGASE (DUF1666)-RELATED 29 431 - -
Vifa2g05763 431 MobiDBLite consensus disorder prediction 14 39 - -
Vifa2g05763 431 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05763 Vifa-Chr2 1703560217 1703562207 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05763 - - gmx:100804417 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05763 2 1703560217 1703562207 Vifa2g05763 2 1703560217 1703562207 ECH