Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05696 ATGGCTGCTACTACTGCTGTTGGTGTTATTGGTGGTAATGGATCTTCTGTTTCATGGATGCAATTTGGAAGAAAAGTTAAGAAACAGAATAAGATGAACAGAGCTAGGGTTTCTTGTTCTTCTTCTTCTGTGATAGATCCTTATAAGACATTGAGGATTCAACCAGGTGCTTCTGAATCTGATATTAGAAAGGCTTTTAGACAACTTGCTTTGCAGTATCATCCAGATGTTTGCAAAGGAAAAGATTGTGGTGTGCAGTTTCATCTAATCAATGAGGCTTATGATGTTGCAATGTCAAATTTGAGAAAAGAAACAAAAAAGGCAGAAACATATAAGGCAACTTATGATAATGAATCATTTAGAGGAAAGAATGATCCAAGTTGGGATTATTGGGAAGAATGGATGGGTTGGGAAGGAGCAGGAATTCGTGACTACACTTCTCATATTAATCCTTACATTTGA 462 0.3658 MAATTAVGVIGGNGSSVSWMQFGRKVKKQNKMNRARVSCSSSSVIDPYKTLRIQPGASESDIRKAFRQLALQYHPDVCKGKDCGVQFHLINEAYDVAMSNLRKETKKAETYKATYDNESFRGKNDPSWDYWEEWMGWEGAGIRDYTSHINPYI 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05696 153 SUPERFAMILY Chaperone J-domain 42 142 IPR036869 -
Vifa2g05696 153 CDD DnaJ 46 96 IPR001623 -
Vifa2g05696 153 PANTHER CO-CHAPERONE PROTEIN DJLA 37 151 - -
Vifa2g05696 153 Pfam DnaJ domain 46 98 IPR001623 -
Vifa2g05696 153 SMART dnaj_3 45 102 IPR001623 -
Vifa2g05696 153 ProSiteProfiles dnaJ domain profile. 46 119 IPR001623 -
Vifa2g05696 153 PRINTS DnaJ domain signature 48 66 IPR001623 -
Vifa2g05696 153 PRINTS DnaJ domain signature 66 81 IPR001623 -
Vifa2g05696 153 PRINTS DnaJ domain signature 82 102 IPR001623 -
Vifa2g05696 153 Gene3D DnaJ domain 20 113 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05696 Vifa-Chr2 1687822470 1687823251 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05696 - - psat:127107225 233.802