Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05671 ATGGCTGCAACTACAAGAAACTATTTACTACCCAAAAATCAAAAACCTTTCTCACATTTCCTCACAAACCCACCTTTTACATATCCAACTCATGTTTCATTGTTAACTTCATTAGACTATCCATCATCACATTATTCCAATTCAACTCGAACACCAAATGTTCGTGTAAATGCCAAAAAGAAAAATCCATGGCTCGACCCTTTTGACGATGGAGAAGACCCTAACATCGAATATGGTTCGTTGTTTTCGGACGGTAAACAAGAGGAGGATCCAAGGCCGCCGGATAATCCAGACAGTCCTTATGGATTCTTGAAGTTTCCAGCTGGTTATACAGTTGAGATAGCTTCTTTGGGATTGAAAATTAGAGGTGATGTTAGGAGGTGTTGTTGTGTGGTGTCTGGTGGTGTTTATGAGAATTTGTTGTTTTTTCCAACTATTCAGTTGATTAAGGATAGGTACCCTGGTGTTCAGATTGACGTTGTGGGTTCTGAGAGAGGGAAACAGTGTTATGAGTTGAATAAGAATGTTAGATGGGCTAATGTTTTTGATCCTGATGATGAGTTTCCTGAGCCTGCTGAGTATACTGATTTTGTTGGAGTTCTAAAGGGTAGGTACTATGACATGGTGTTAAGCACAAAATTGGCAGGCGTTGGTCATGCAGTATATTTATTCCTGACAACTGCGCGAGATAGAGTTAGCTATGTCTACCCAAATGTGAATGCTGCAGGGGCAGGATTGTTTCTATCTGAAACATTCACACCTGATAGTGCAAATCTTTCAGAGGGAGGATTTCATATGTATCATCAGATGGAAGACTGGCTAGGAAGACCGTTTCGAAGCGTTCCAAGGCAGGTTGTGCCACCACTTAAAATATCACTTTCAAGGAAGTTGAAGGAAATTGTGGAGGAGAAATACACAAAAGTCGGTGTAAGGAAAGGAAAATATGTTGTGATTCATGGGATACAATCAGATTCAAAGGCCACAATGCAGTCTAGGGGCGATCCTGATAGCTTACTTCCTCTTGAAGTGTGGGCTGAAATTGCTGATGCGATAAGGGAATTTACGCCACTTTTTGTCATTCCACATGAGAAAGAAAGGGAAAATGTTGAGGAAATTGTTGGAGAAGATGCCTCCATAATCTTCATCACCACCCCTGGACAGTTGGCTGCTCTTATTAATGACTCGGCTGGAGTAATAGCTACCAATACAGCTGCAATTCAGCTGGCGCACACACGCGGAAAACCTAGTGTTGCACTATTTTGCTCTAAAGAGAAGGGAAACAAGTTTGTTCCCCAGGCTGAAGAGAAGAAATGCATTGTAATATCATCAAAGACGGGGAAGTTGATTGATATAGATGTTGAGGCTGTACAAAATGCAATTCAGACTTTCAATTTGTCTCTAGCTTTTGCGTAG 1413 0.4119 MAATTRNYLLPKNQKPFSHFLTNPPFTYPTHVSLLTSLDYPSSHYSNSTRTPNVRVNAKKKNPWLDPFDDGEDPNIEYGSLFSDGKQEEDPRPPDNPDSPYGFLKFPAGYTVEIASLGLKIRGDVRRCCCVVSGGVYENLLFFPTIQLIKDRYPGVQIDVVGSERGKQCYELNKNVRWANVFDPDDEFPEPAEYTDFVGVLKGRYYDMVLSTKLAGVGHAVYLFLTTARDRVSYVYPNVNAAGAGLFLSETFTPDSANLSEGGFHMYHQMEDWLGRPFRSVPRQVVPPLKISLSRKLKEIVEEKYTKVGVRKGKYVVIHGIQSDSKATMQSRGDPDSLLPLEVWAEIADAIREFTPLFVIPHEKERENVEEIVGEDASIIFITTPGQLAALINDSAGVIATNTAAIQLAHTRGKPSVALFCSKEKGNKFVPQAEEKKCIVISSKTGKLIDIDVEAVQNAIQTFNLSLAFA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05671 470 Gene3D Glycogen Phosphorylase B; 139 274 - -
Vifa2g05671 470 MobiDBLite consensus disorder prediction 60 100 - -
Vifa2g05671 470 Gene3D Glycogen Phosphorylase B; 300 466 - -
Vifa2g05671 470 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 1, CHLOROPLASTIC 13 470 IPR044983 GO:0009507|GO:0009773|GO:0010598
Vifa2g05671 470 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 138 463 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05671 - - gmx:100802136 752.281