Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05656 ATGGACTACAGCTCTGAAGAAGAGTCAGATATCAGTGAATCTGAGATTGAAGAATATTCTGAGAAACCTTACGAACAGTTAAAGGATGGGAAATACAAAGTTCGGAATTTCAATGGCTCTCTAAGGTGCCCATATTGTTCTGGAAAAAAGAAGCAGGAATTCAAATATAAAGACTTGTTGCAACACGCAACTGGGGTAGGTAAAGGTTCAGCGAACAGAAGCGCAATGCAAAAGGCAAACCACCTTGCTTTGGCAAAGTATTTGCAGACTGACCTAGTTAATGAAGCAGAACAAGTACCTCGTCCAGCTGTGACCCAAACTGCCATTCAACCTGTCCAGCAAGTTGAGAATTATGTTTGGCCGTGGACAGGCATAATTGTTAACATAAAGAGTGAACTGCATGATTCTGGATACTGGCTAAAGGAATTTGTCAAGTACAGACCATTGGATGTACATGTATTCAAGAAGGATGGTGATGTTCAGGCTGTAATAGACTTTAACAAAGAATGGAATGGTTTCATGAATGCATGTGAATTTGAAAAATTCTTGGAAACTAAACATCATGGAAAAAGGGATTGGAATCCGATGGACTTGCAGGCCAGTTCAGACATTTATGGGTGGGTTGCACGTGAAGATGACTTTTATGGTGGAGGGCCAATTGGGGAGTACCTTCGCAACAAAGGAAGGCTGAGAACAATTTCTGATATTGTACAAGAAGCATCTGAAACCAGAAACATCATTGTGTCAAACTTGGCTAATGAAATTGATAATACAAATGAAACCCTCAACAAAATGCAGTATAAGTATAATGAGAAGACTATGTCCTTAAGCAGAATGCTGGAGGAGAAAGACAAGCTTCACAATGCTTTTGTTGAAGAGTCGAGGAGTATGCAGCGTAAAGCTCGTGAGGAGGTACGAAGGATCTTGGAAGAACAAGAAAAGTTGAGTAATGAATTGGATGAGAAAATGCGGAAGCTTGACTCTTGGAATAGAGATCTGAATAAACGCGAGGTTCTAACTGATCAAGAGAGGCAGAAACTTGAAGAGGACAAGAAGAAGAAAGAAATAAGGAATGATTCACTCTTGGCGGCTTCAAAGGAGCAGAAGATAGCTGATGAAAATGTCTTCAGGCTTGTTGAAGAGCAAAAGAGAGAAAAAGAAGAGGCCTTAAACAAGATCCTTTTATTGGAAAAGCAACTAGATGCCAAACAAAAGTTGGAAATGGAAATTGAAGAGTTGAAAGGGAAATTGCAAGTTATGAAACATCTTGGAGATCAAGATGACGCAGCTATCAAGAAAAAGATGGAAGAAATGAATTCTGAATTGGTTGAGAAAATAGAGAGTTTGGAGGATATGGAGGCCATGAATCAAACCCTCGTGGTCAAAGAGCGCCAGAGCAATGATGAACTTCAGGATGCTCGTAAAGAATTAATAGAAGGGTTAAATGAAATGCTGTCTGGTAAAACTAATGTTGGGACCAAGAGAATGGGAGACCTTGACCAGAAGGTTTTTGTGAATGCCTGCAAGAAAAGATTTTCTGAAGAAGAAGCTGGGATAAAGGGCGTTGAGCTTTGCTCTATGTGGCAGGAGAATGTGAAGAATACAGCTTGGCATCCTTTTAAAAATGTTCAAAAGAATGATACTTTTGTGGCAGTTGTAGATGAAGAAGATGAGAAACTACGAAATCTCAAGCAGGAATGGGGAGATGAGGTATATTCAGCTGTTGAAACTGCCTTGAAAGAAGTAAATGAATACAATCCAAGTGGTGGCTATACTGTTTGGGAGCTATGGAACTTCAAGGAAAAGAGAAAGGCAACATTGAAAGAAGTTATTACTTATATTGTGGAACACATGAAGAACCTCAAGCGCAAGAGAAAATAG 1881 0.3966 MDYSSEEESDISESEIEEYSEKPYEQLKDGKYKVRNFNGSLRCPYCSGKKKQEFKYKDLLQHATGVGKGSANRSAMQKANHLALAKYLQTDLVNEAEQVPRPAVTQTAIQPVQQVENYVWPWTGIIVNIKSELHDSGYWLKEFVKYRPLDVHVFKKDGDVQAVIDFNKEWNGFMNACEFEKFLETKHHGKRDWNPMDLQASSDIYGWVAREDDFYGGGPIGEYLRNKGRLRTISDIVQEASETRNIIVSNLANEIDNTNETLNKMQYKYNEKTMSLSRMLEEKDKLHNAFVEESRSMQRKAREEVRRILEEQEKLSNELDEKMRKLDSWNRDLNKREVLTDQERQKLEEDKKKKEIRNDSLLAASKEQKIADENVFRLVEEQKREKEEALNKILLLEKQLDAKQKLEMEIEELKGKLQVMKHLGDQDDAAIKKKMEEMNSELVEKIESLEDMEAMNQTLVVKERQSNDELQDARKELIEGLNEMLSGKTNVGTKRMGDLDQKVFVNACKKRFSEEEAGIKGVELCSMWQENVKNTAWHPFKNVQKNDTFVAVVDEEDEKLRNLKQEWGDEVYSAVETALKEVNEYNPSGGYTVWELWNFKEKRKATLKEVITYIVEHMKNLKRKRK 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05656 626 Coils Coil 248 268 - -
Vifa2g05656 626 Coils Coil 432 455 - -
Vifa2g05656 626 MobiDBLite consensus disorder prediction 1 15 - -
Vifa2g05656 626 PANTHER RIBONUCLEASE P SUBUNIT P38 3 626 IPR045177 GO:0080188
Vifa2g05656 626 Pfam XS zinc finger domain 43 85 IPR005381 GO:0031047
Vifa2g05656 626 Pfam XH domain 494 624 IPR005379 -
Vifa2g05656 626 Pfam XS domain 116 214 IPR005380 GO:0031047
Vifa2g05656 626 MobiDBLite consensus disorder prediction 1 23 - -
Vifa2g05656 626 Coils Coil 379 423 - -
Vifa2g05656 626 Coils Coil 291 364 - -
Vifa2g05656 626 Gene3D XS domain 111 270 IPR038588 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05656 Vifa-Chr2 1678160737 1678169276 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05656 - - gmx:100798940 962.214