Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05653 ATGGAGGTACCTACTTCATGGGATTCTCTTCGCAAACAGGCAAGAAAACTTGAAGCTCAATTGGATGAGCAGATGAATGTTTATCGTAAATTAGTTTCTACCAACGTTTCGACAAAAGGTGATGCTGCAGAGAGTGATGTAGAGTCTTGGATTGAGCGGTTAATAAAACAACTCCAACAAGTAAACTCACATATGCAAGCTTGGGTGTCATCTGGTGGTTCAGATATGGTTTCTCATACTTTGACTAGACACCAAGAAATTCTTCAAGATCTCGCACAGGAATTTTATCGTCTTCGCTCAAGTCTTCGAGCAAAGCAAGAACATGCTTCACTTTTAGACGATTTTAAAGAATTTGATAGGTCAAGATTAGACTTGGAAGAGGGTGGTGAATCTGAACAGCATACGCTCCTAAAAGAGCATGCATCTATCAGTCGAAATACCGGACATATGGACGGTGTAATTTCACAAGCACAAGCAACACTAGGAGCACTTGTCTTTCAACGTTCAACATTTGGTGGCATCAATTCAAAGCTCAGCAACGTGAGCAGTCGCCTCCCAACGGTAAATAACATACTCTCGGCAATAAAGCGAAAAAAGTCAATGGATACCCTTATACTTTCTCTTGTGGCATCTGTATGCACATTTCTCATTTTGATCTACTGGATAACCAAATAA 675 0.4044 MEVPTSWDSLRKQARKLEAQLDEQMNVYRKLVSTNVSTKGDAAESDVESWIERLIKQLQQVNSHMQAWVSSGGSDMVSHTLTRHQEILQDLAQEFYRLRSSLRAKQEHASLLDDFKEFDRSRLDLEEGGESEQHTLLKEHASISRNTGHMDGVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPTVNNILSAIKRKKSMDTLILSLVASVCTFLILIYWITK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05653 224 Coils Coil 7 34 - -
Vifa2g05653 224 PIRSF Golgi_SNARE 1 223 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
Vifa2g05653 224 Pfam Snare region anchored in the vesicle membrane C-terminus 136 199 - -
Vifa2g05653 224 PANTHER GOS-28 SNARE- RELATED 4 222 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05653 Vifa-Chr2 1677584383 1677586994 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05653 K08495 - gmx:100797885 382.874