Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05645 ATGTTACTTTGTGGAAAAGCTTCACTAAACGGCGCCGCTTCGGGATCGGTGCCGGTGTATCTTAACGTGTACGATCTGACAACATTCAACGGTTACGCTTACTGGCTTGGTCTCGGAGTTTACCATTCCGGCGTTCAAGTTCATGGGGTGGAGTATGCATTTGGGGCACATGAGCATGAATCAACGGGAATATTTGAAGGAGATCCAAAAAAGTGTGAAGGTTTTAGATTTAGGAAGACAATATTGATTGGAAAAACAGATAAAGAGTTTGGTGAAGTGAGGGAAGTGATGCAAAAACTTGGTGGTGAATACAAAGGAAATGCTTACAATTTGATTACAAAAAATTGTAACCATTTTTGCAATGATGCTTGTGTTAAGCTCACTGGAAATTCTATACCTAGTTGGGTTAATCGTCTTGCTAGAATTGGTTTTATATGCAATTGTGTTATACCAGTATCATTGAATTCAACAAAAGTGAGACATCATCATAGAATAGAGGACAAACAATGTGAAGAAGAGAAACAAATTAAACAAGCATTAACAAATGAACCAAACAAAGTTAATGTTTCAAATTCAACATCATCTTCACCAGCAGCTTCTACTAGCTCTGGATTAAGAAGAGGAAGAAGTCGAACAAGACGACCTCTTCCTCCATCTTCACCTTTGATTGTTGCTTCCTCTTCTTCTTGA 690 0.3841 MLLCGKASLNGAASGSVPVYLNVYDLTTFNGYAYWLGLGVYHSGVQVHGVEYAFGAHEHESTGIFEGDPKKCEGFRFRKTILIGKTDKEFGEVREVMQKLGGEYKGNAYNLITKNCNHFCNDACVKLTGNSIPSWVNRLARIGFICNCVIPVSLNSTKVRHHHRIEDKQCEEEKQIKQALTNEPNKVNVSNSTSSSPAASTSSGLRRGRSRTRRPLPPSSPLIVASSSS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05645 229 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Vifa2g05645 229 MobiDBLite consensus disorder prediction 180 206 - -
Vifa2g05645 229 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Vifa2g05645 229 PANTHER DESUMOYLATING ISOPEPTIDASE 16 195 IPR008580 GO:0008233
Vifa2g05645 229 MobiDBLite consensus disorder prediction 180 229 - -
Vifa2g05645 229 Gene3D PPPDE domains 13 172 IPR042266 -
Vifa2g05645 229 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05645 Vifa-Chr2 1675655006 1675657307 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05645 K22763 - gmx:100796813 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05645 2 1675655006 1675657307 Vifa2g05645 2 1675655006 1675657307 ECH