Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05644 ATGCGACGCGCTGCATCCAAGAAAACGGGTCAATCCAATTCCAACGTCAATTCCTCCGCCACGGATCTATTCCGCTCCGCTTCGAGTAAAGCTAACTCAAAGGAGCTGGAGCGAATTGATAGTCTATTTTATTCTTATGCCAATGGATCTAGCGGAGTGATTGACCCAGAAGGAATTGAAGCACTCTGTGCTGATATGGAAATAGATCATACTGATTTGAGGATTTTGATGCTAGCGTGGAAAATGAAATCTGAGGAGCAAGGATATTTTACCTTGGATGAGTGGAGGAGAGGCTTAAAAGCACTAAGAGCTGATACAGTAAGTAAATTGAAAAAGGCACTTCCAGACCTAGAGAAGGAGGTCAGGAGGCAGTCAAATTTTTCAGATTTCTATTCGTATGCTTTTCAATATTGTCTAACAGAGGAGAAACAGAAAAGCATTGATATAGAGAGCATATGTGAATTACTTACTCTTGTTCTGGGTTCAACATTTCCAGTTCAAGTCAGCTTATTTGTGGAATATTTGAAGAATCAAAATGATTACAAGGTCGTAAACATGGACCAGTGGATGGGTTTTTTCCGGTTTTGCAATGAGATAAGTTTTCCGTCGCTCAATGACTATGATCCTGAACTTGCATGGCCCTTAATCCTGGATAATTTCGTTGAGTGGTTGCGAGAAAAGCACACGTAA 690 0.4087 MRRAASKKTGQSNSNVNSSATDLFRSASSKANSKELERIDSLFYSYANGSSGVIDPEGIEALCADMEIDHTDLRILMLAWKMKSEEQGYFTLDEWRRGLKALRADTVSKLKKALPDLEKEVRRQSNFSDFYSYAFQYCLTEEKQKSIDIESICELLTLVLGSTFPVQVSLFVEYLKNQNDYKVVNMDQWMGFFRFCNEISFPSLNDYDPELAWPLILDNFVEWLREKHT 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05644 229 MobiDBLite consensus disorder prediction 1 21 - -
Vifa2g05644 229 FunFam Defective in cullin neddylation protein 32 122 - -
Vifa2g05644 229 Gene3D - 32 122 - -
Vifa2g05644 229 MobiDBLite consensus disorder prediction 7 21 - -
Vifa2g05644 229 ProSiteProfiles DCUN1 domain profile. 34 225 IPR005176 -
Vifa2g05644 229 Gene3D Cullin, PONY binding domain 123 229 IPR042460 -
Vifa2g05644 229 FunFam Defective in cullin neddylation protein 124 229 - -
Vifa2g05644 229 PANTHER RP42 RELATED 9 228 IPR014764 -
Vifa2g05644 229 Pfam Cullin binding 109 223 IPR005176 -
Vifa2g05644 229 SUPERFAMILY EF-hand 29 192 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05644 Vifa-Chr2 1675649907 1675653282 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05644 K17824 - gmx:100776788 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05644 2 1675649907 1675653282 Vifa2g05644 2 1675649907 1675653282 ECH