Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05637 ATGGCGCTCCTTCTCCGTCTCAAAACAACAAGACTCAAAACCCACACTCTCACCAACTCTCCTTCACTCCACCACCTCTTCTCCACCTCCAATGCCGGAGGAGACGGTGGCGATGGTGGCAACCATGGAAACCGACCTTCTTCCGACGCCTTCGCCGCTTTACGCGATCTTAGAAGCACGCTCAAACGACAACCATCCTCGAACAATCCTTCCCCTCTCTTTTCCCCCAATTCGCAACAGAGCGAATCCATCATGAACAAAATCCAGAATTTCCGAAGCCCGACCGAAGATCCATCTTCGCAGAAGAAGCAAATCTCGTTTCAGGAAATGTACATCAACATCAGGAACCGTTCCGGTGATTCCGGAGAAAATTCTGGTTCGGAACGCCGCGGCGGCGCTATGCCTATCGAAGTTATTCGCGGAAGCTTAATGCAGCTCAAAGGTACGAATCCAACGCCGTCCCCGAGTTGGAGGCCTTCTCCGAGTTCCTCGTTCGGTGGGACTAGTACTATGCCGGATTTAATTTTTGGAAAGGAGATAAGGGAACGATTAGCGAAGGGTAATGATGCTTCGGTGAGTTTGAAGAATTTCGGGTCTGTTAGGCTGATGATGCCTGATGAGCTGGGTGAGAAATTGAAGAAATTGAGACCTCCAGTGAAAGGAAAAGAATGGTTTTCAATTGCTGAATTGAATGAGAGGTTGAAGAAAGTGATGAAGGAGATGGATGAAATTAAAGCGAATTCCAGTTCCAGTGAAAAAGGAGTATATAACATTTTGAAAGATTCTGTTAACCATATTAGAGCTAAAGATGCCGAGAAGCCAAAGATTGCTTCACTGCAGAGAGTTAATTTTTTGTCCGTGATGGGCGGGACTCCATCCTTCATGACAAAGCCTCCTAAAGAGCATCTTGTTGAAAAGTATTTTCATCCAGATAACATGTCCTCTGCCGAAAAGTTGAAAATTGAACTCACGAAGGTTAGAGATGAATTTAAGATGTCCGAGTCAGATTGTGGCTCTGCTCGTGTTCAAGTTGCCACTCTCACAACCAAGATTAAGCATCTATCATCAGTTCTACACAAAAAGGATGTGCATTCTCGGAAAGGTCTGATAGCAATGGTACAGAAGAGGAAAAAGTTGCTGAAATACCTCAGAAGAACCGACTGGGATTCCTATTGTTTTGTTATCTCTAAGCTAGGTCTACGTGATAATCCAGAACATACTTATAAAGCCCGGACAGGTAAATCGGGTGATGTAGCCAATTAA 1263 0.4513 MALLLRLKTTRLKTHTLTNSPSLHHLFSTSNAGGDGGDGGNHGNRPSSDAFAALRDLRSTLKRQPSSNNPSPLFSPNSQQSESIMNKIQNFRSPTEDPSSQKKQISFQEMYINIRNRSGDSGENSGSERRGGAMPIEVIRGSLMQLKGTNPTPSPSWRPSPSSSFGGTSTMPDLIFGKEIRERLAKGNDASVSLKNFGSVRLMMPDELGEKLKKLRPPVKGKEWFSIAELNERLKKVMKEMDEIKANSSSSEKGVYNILKDSVNHIRAKDAEKPKIASLQRVNFLSVMGGTPSFMTKPPKEHLVEKYFHPDNMSSAEKLKIELTKVRDEFKMSESDCGSARVQVATLTTKIKHLSSVLHKKDVHSRKGLIAMVQKRKKLLKYLRRTDWDSYCFVISKLGLRDNPEHTYKARTGKSGDVAN 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05637 420 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 407 - -
Vifa2g05637 420 NCBIfam 30S ribosomal protein S15 324 401 IPR005290 GO:0003735|GO:0005840|GO:0006412
Vifa2g05637 420 SMART Ribosomal_S15_2 323 401 IPR000589 GO:0003735|GO:0005840|GO:0006412
Vifa2g05637 420 MobiDBLite consensus disorder prediction 62 81 - -
Vifa2g05637 420 Coils Coil 227 247 - -
Vifa2g05637 420 MobiDBLite consensus disorder prediction 23 49 - -
Vifa2g05637 420 Coils Coil 316 336 - -
Vifa2g05637 420 Gene3D - 319 366 - -
Vifa2g05637 420 Pfam Ribosomal protein S15 325 401 IPR000589 GO:0003735|GO:0005840|GO:0006412
Vifa2g05637 420 MobiDBLite consensus disorder prediction 148 169 - -
Vifa2g05637 420 CDD Ribosomal_S15p_S13e 322 399 IPR000589 GO:0003735|GO:0005840|GO:0006412
Vifa2g05637 420 SUPERFAMILY S15/NS1 RNA-binding domain 323 402 IPR009068 -
Vifa2g05637 420 Hamap 30S ribosomal protein S15 [rpsO]. 313 402 IPR005290 GO:0003735|GO:0005840|GO:0006412
Vifa2g05637 420 Gene3D - 368 403 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05637 - - cam:101488736 451.44