Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05626 ATGTCTTCTCTAAGGTCTACTATGTCATATAATTCTAAATCAAACTTCGATGAACTTAGATGGGTGATTCATATCCGAAAAACTCTTGAAGAAGAATTCGAAGAAGAAGATAATGAATTATCTGTAACAATTTTCAATGTGCCAAAGCTTCTTATGGCTAGTGATCCAGATTCATATGTTCCACAACAGGTTGCAATTGGTCCATACCATTATTGGCGACCAGAACTCTATGAAATGCAAAGTTACAAGCTTGCAGCAACAAAAAGATTCTTAAAATCATTACAAACTTTCAAGTTAGACAAACTTGTTGACCAATTGACAAAGTTTGAACAAAGGGTTAGATCATGTTATCACAAATATTTAGATTTGAACGGCGAAACGATGGTGTGGATGATGATTGTTGATGCATCATTCTTACTTGAGTTACTTCAAATTTATGCAATGCAAGAAGGTGTAACGAGAAGGGTAGTTTCGTCAAGCATGTCACATTTGGTGGATTATGCTGGAAGAAAATCAGCTCATAATGCAATGTTGAGAGACATTGTGATGTTAGAAAATCAAATTCCATTATTTGTTTTGAGAAAATTGCTCGAGTTCAAATTTTCTTCACTCGAAGCGGTCGATGAAATGTTGATTTTCATGTTTATAGGTTTATTTAAACAAATTTCACCTTTCAAGATGATTGAAGAGTTTCCAAACATTAAAGTCTCTGAAAGCGCACATTTGTTAGATTTCTTTTATGACATGATTGTCCCTAAATTAGAAACCGAACATGATATTGCTGTTGATGTTGAGATTCAAGAAGAAGATGAACAAGATCACAAAGGAGATGATGGAAATTCAAAAAGTGAGTCTAGTTATGTGAAACAATCATTCCATGAAATTTGGAATATTCTCTCAAAACTTAACAAAGGACCTATGCAATTACTAAAAAGGGCACTTGTATCAAAACCTTTGAAAGTTCTTGTTAAGTTTCCTTGGAAAATCATAACCAATCTTCCAGGAGGTAAACTTCTAAAACAACCTATTGAATATTTATTTTTCTCTAAAGAAAAAGGTGATGAAGAAAATAAAAAAAATGAAACTTCTAGTACTTTTATTAACAAGCCACCTTTGATTGAAGAAATAACTATTCCTTGTGTTAAAGAACTCATCAATTCGGGTGTTCGATTTTGTCCTGCGAAAGAAGGAACCATATCAAGCATTAATTTTGACGAGAAAACAAGAATGTTTTACCTTCCTATAATTAGTTTGGATGTTAATACCGAAGTGTTTTTACGAAACTTGGTTGCGTACGAATCATCTGTCGGATCAGGACCATTGGTTATAACTCGTTACACTGAATTGATGAATGGAATAATAGATTCGGAGGACGACGCAAAGATTCTAAGAGAAAAAGGGATCATATTAAATCACTTAAAGAGTGACAAAGAAGTTGCTAACATGTGGAATGGAATGAGTAAGTCATTGAGATTGTCGAGGGTTTTTTTCTTGGATAAGACTATTGAAGATGTTAACAAGTTTTATAATAGTAGAATGAAGGTGAAAATTTGGAAATTTATGAAGTCTTATGTGTTTGGTTCATGGAAGATTTTGACATTTTTAGCGGCAATTTTCTTGTTGCTTTTGATGGTTGTGCAAGCTTTTTGTTCTGTTTATACTTGTAGTCGCTTCTTTGAATCAACATTACAACAAAGTGATTGA 1704 0.3304 MSSLRSTMSYNSKSNFDELRWVIHIRKTLEEEFEEEDNELSVTIFNVPKLLMASDPDSYVPQQVAIGPYHYWRPELYEMQSYKLAATKRFLKSLQTFKLDKLVDQLTKFEQRVRSCYHKYLDLNGETMVWMMIVDASFLLELLQIYAMQEGVTRRVVSSSMSHLVDYAGRKSAHNAMLRDIVMLENQIPLFVLRKLLEFKFSSLEAVDEMLIFMFIGLFKQISPFKMIEEFPNIKVSESAHLLDFFYDMIVPKLETEHDIAVDVEIQEEDEQDHKGDDGNSKSESSYVKQSFHEIWNILSKLNKGPMQLLKRALVSKPLKVLVKFPWKIITNLPGGKLLKQPIEYLFFSKEKGDEENKKNETSSTFINKPPLIEEITIPCVKELINSGVRFCPAKEGTISSINFDEKTRMFYLPIISLDVNTEVFLRNLVAYESSVGSGPLVITRYTELMNGIIDSEDDAKILREKGIILNHLKSDKEVANMWNGMSKSLRLSRVFFLDKTIEDVNKFYNSRMKVKIWKFMKSYVFGSWKILTFLAAIFLLLLMVVQAFCSVYTCSRFFESTLQQSD 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05626 567 Pfam Plant protein of unknown function 44 543 IPR004158 -
Vifa2g05626 567 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 35 552 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05626 Vifa-Chr2 1668338884 1668340587 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05626 - - vun:114165667 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05626 2 1668338884 1668340587 Vifa2g05626 2 1668338884 1668340587 ECH