Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05619 ATGGATTGGTTCTCATGGCTTTCAAAAACAAATCTTGATCCATCTCTTGTATATGAGTATGGCCTAACCTTTTCACACAATGAGCTAGAACAAGAAGACATGGTTTACTTCAACCATGAGTTTCTCCAAAGCATGGGAATCTCCATAGCCAAACATAGGCTAGAAATTCTCAAACATGCAAGAAAAGAAAAGTCAAAGAGACAACCACCAAGACCAGTTGCAAAGATCATGGTAGCAATCAAAAAGACAAAAAAGTGCTTAGAGGACTACATCATGAGAAAATTGGTTACATGTGAGGAACCAAATTCAGCACTTGTAGTTGTACCAACATCAAGACCTAGTAATAGTGCTTATTATGGAACAAGATCATCATGGAAGAGTAGTTCTTTGAAGAGGAGTAGTAAGAAGATGAAAGTGGAGAAACAAGAGAGGCTATTGCTTACAAATGGTAGTCCTAGTCCTACAGTGATGCCTGGTTTTGCTCTTGATAGTTTTTCTAGTACTCCTATGGTTTACCATTTTCATGAAGGAAAGATGAAAGGAGAAGATGATGATAATAATGGTTATTGGTCTGCTGCTGTTGAAGATATCAGGTGGGATACTATGTTTCAAGATCTAAAGCCAAATTAA 630 0.373 MDWFSWLSKTNLDPSLVYEYGLTFSHNELEQEDMVYFNHEFLQSMGISIAKHRLEILKHARKEKSKRQPPRPVAKIMVAIKKTKKCLEDYIMRKLVTCEEPNSALVVVPTSRPSNSAYYGTRSSWKSSSLKRSSKKMKVEKQERLLLTNGSPSPTVMPGFALDSFSSTPMVYHFHEGKMKGEDDDNNGYWSAAVEDIRWDTMFQDLKPN 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05619 209 SUPERFAMILY SAM/Pointed domain 5 69 IPR013761 -
Vifa2g05619 209 Gene3D - 1 68 IPR013761 -
Vifa2g05619 209 PANTHER OSJNBA0033G05.11 PROTEIN 1 209 - -
Vifa2g05619 209 CDD SAM_superfamily 2 62 - -
Vifa2g05619 209 Pfam SAM domain (Sterile alpha motif) 23 61 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05619 Vifa-Chr2 1667247659 1667248288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05619 - - psat:127105389 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05619 2 1667247659 1667248288 Vifa2g05619 2 1667247659 1667248288 ECH