Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05612 ATGTCTAAAGATGATGTTTTCATTGGATCAATTGATCAAGGAACAAGCAGCAGCAGGTTCATGATCTATGACAAATCAGCTAAAGCAATTGGATCTCACCATGTTGAATTCACTCAATTTTATCCAGAAGCGGGGTGGGTGGAGCATGATCCAATGGAGATATTGGAAAGTGTGAAGGTTTGTATTACAAAGGCAGTGGATAAGGCAACAGCTGATGGATTTAATGTGAGTAAAGGGTTGAAAGCTATTGGGATTACAAATCAAAGAGAGACTACTCTTGTTTGGAGCAAATCCACTGGTGCTCCTCTTCACAATGCTATTGTTTGGATGGATGTTCGCACTGCCTCCGTTTGCAGGAGACTCGAAAAGGAGTTATCTGGTGGTAGAACGCACTTCGTAGAGAGTTGCGGTTTACCTATTAGCACATATTTCAGTGCTTTGAAACTTCTGTGGTTGATGGAAAATGTGGATGCTGTCAAGGAAGCTATAAAGAAAAAGGATGCCTTGTTCGGAACCATAGACACTTGGTTGATATGGAATTTAACCGGTGGAGTGAAAGGAGGATTACACGTTACGGATGCTTCAAATGCATCCCGAACAATGCTGATGAACCTAAAAACCCTCAAATGGGATGAATCCACTTTGGAAGCACTTGAAATCCCACCTGAGATTTTGCCTAAAATTATTAGTAATTCAGAAATTATAGGCAATGTAACTACCGGATGGCCAATTTCCGGCATCCCTATCTCTGGATGTTTAGGTGATCAACATGCGGCCATGCTCGGGCAAGCGTGCCGTAAAGGTGAGGCTAAAAGTACTTACGGAACAGGTGCATTCATTCTATTGAATACCGGTGAAGAAGTAGTTCAATCGACGCATGGCCTACTATCAACTATAGCTTTTAAGCTTGGTCCTAATGCTCCGACCAATTATGCGCTTGAAGGGTCCGTTGCTATCGCTGGAGCAGCGGTGCAATGGATTAGAGACGGTCTTAATCTCATTTCAAATGCCAGTGAAATAGAGGCTATGGCATCAGGAGTTGAATCCAACGGTGGTGTTTACTTTGTTCCTGCTTTCAATGGATTGTTTGCTCCGTGGTGGCGTGATGATGCTCGTGGGGTTTTAATTGGAATTACGAGGTATACAAATAAGGGTCACATTGCTCGAGCCGTGCTGGAGAGCATATGTTTTCAAGTGAAAGATGTCATTGATTCAATGTGCAAAGATTCTGGATTCAATGAATCAAAGATAGAAGAGTTCTTGCTTAGAGTGGATGGGGGTGCAACTGTTAACAACCTGATGATGCAGATTCAGGCGGATTTGTCGGCAACTCCTGTAGTTAGACCGGCTGACGTTGAAACAACAGCACTTGGAGCAGCATATGCAGCTGGATTAGCAGTTGGAGTTTGGAAAGAAGATTACATTTTCGATTCAAAGGAAAAGATGAAGAATGCAAACATTTTCCGGCCTCTAATCAATGAAGAAATGAGGAAAAAGAAAGCAGATTGTTGGTTAAAAGCAGTTAATAAATCTTTTGACTTAGCTGATCTTGCTCTCTAA 1560 0.4224 MSKDDVFIGSIDQGTSSSRFMIYDKSAKAIGSHHVEFTQFYPEAGWVEHDPMEILESVKVCITKAVDKATADGFNVSKGLKAIGITNQRETTLVWSKSTGAPLHNAIVWMDVRTASVCRRLEKELSGGRTHFVESCGLPISTYFSALKLLWLMENVDAVKEAIKKKDALFGTIDTWLIWNLTGGVKGGLHVTDASNASRTMLMNLKTLKWDESTLEALEIPPEILPKIISNSEIIGNVTTGWPISGIPISGCLGDQHAAMLGQACRKGEAKSTYGTGAFILLNTGEEVVQSTHGLLSTIAFKLGPNAPTNYALEGSVAIAGAAVQWIRDGLNLISNASEIEAMASGVESNGGVYFVPAFNGLFAPWWRDDARGVLIGITRYTNKGHIARAVLESICFQVKDVIDSMCKDSGFNESKIEEFLLRVDGGATVNNLMMQIQADLSATPVVRPADVETTALGAAYAAGLAVGVWKEDYIFDSKEKMKNANIFRPLINEEMRKKKADCWLKAVNKSFDLADLAL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05612 519 NCBIfam glycerol kinase GlpK 7 512 IPR005999 GO:0004370|GO:0006072
Vifa2g05612 519 PIRSF GlpK 5 517 IPR000577 GO:0005975|GO:0016301
Vifa2g05612 519 SUPERFAMILY Actin-like ATPase domain 265 511 IPR043129 -
Vifa2g05612 519 FunFam Glycerol kinase 264 514 - -
Vifa2g05612 519 Gene3D - 3 263 - -
Vifa2g05612 519 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 143 155 IPR018483 GO:0005975|GO:0016773
Vifa2g05612 519 Gene3D - 264 513 - -
Vifa2g05612 519 Pfam FGGY family of carbohydrate kinases, C-terminal domain 270 466 IPR018485 GO:0005975|GO:0016301
Vifa2g05612 519 FunFam Glycerol kinase 5 263 - -
Vifa2g05612 519 ProSitePatterns FGGY family of carbohydrate kinases signature 2. 373 393 IPR018483 GO:0005975|GO:0016773
Vifa2g05612 519 PANTHER SUGAR KINASE 7 513 - -
Vifa2g05612 519 Pfam FGGY family of carbohydrate kinases, N-terminal domain 8 262 IPR018484 GO:0005975|GO:0016301
Vifa2g05612 519 SUPERFAMILY Actin-like ATPase domain 8 265 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05612 Vifa-Chr2 1663304635 1663306964 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05612 K00864 - gmx:547750 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05612 2 1663304635 1663306964 Vifa2g05612 2 1663304635 1663306964 ECH