Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05601 ATGCTGTTTTCTGCTAAGTTTTCTCCTACTCTCAACCTTGCCATTTCTTCAACTACCAAGTGTTGTAGCAGAAGAAGAGAATCAAGGAGAGGGTTGAATAGTATGAGAGTAAGAGCTAGCTCAACACAAAAAGATGAAGATGAGAAATCTTCCTTCAATCCTTTTGGATTTGTTACTGATAATGCATCAAGCCGTAGTGCCATTCAATTGCCTGAAAGCCCCGCTGAAGATGGCAACGTTGGACAAATGATTGATAAAATACAAGACAAGGGCAAGGAATTTGGGTCATATGTGAAATCCGGGAAGTTGAGATGGTTTGTGAGGGAAACTGGATCAGCAAAAAGCAGACGAGGCACAATCGTTTTCCTTCACGGTGCCCCAACACAATCTTTTAGTTACCGAGTCGTTATGTCTCAGTTGGCAGATGCAGGGTTCCATTGCTTTGCACCTGACTGGATAGGATTTGGTTTCAGCGATAAACCACAACCAGGATATGGTTTTAATTACACAGAAAAGGAGTTTCATGATGCATTGGATAAACTTCTTGAAGTGTTGAAGATCGAATCTCCGTTTTTCCTAGTTGTTCAGGGATTTCTTGTAGGTTCATATGGATTAACATGGTCCTTGAAGAACTCAAGCAAGATATCAAAGCTAGCAATACTAAACACTCCATTAACCGATTCATCTCCCATTCCTGGACTATTTCAGCAGCTAAGATTTCCTCTATACGGTGAATTTCAATGCCAGAATGCTATTATTGCTGAGCGGTTTATTGAAGCAGGTAGCCCTTATGTTCTGAAAAATGAAAAGGCTGATGTTTACCGGCTACCGTATTTGGCAAGCAGTGGACCTGGATTCGCTCTACTCGAAGCTGCAAGAAAAGCTAATTTCAAAGGTACTTTCAGTGAAATAGCAGAAGGATTTGCGACTAACAGATGGGATAAACCTGTACTGCTTGCTTGGGGATTATCAGACAAGTACTTGCCACAATCTATAGCTGAGGAGTTTCAGAAAGGAAATCCTCAAAACATCAAACTTAAATTGATAGAAGGAGCCGGTCATATGCCGCAAGAGGATTGGCCTGAGAAAGTTGTTGATGCTTTCAGAATGTTCTTTTGA 1119 0.4111 MLFSAKFSPTLNLAISSTTKCCSRRRESRRGLNSMRVRASSTQKDEDEKSSFNPFGFVTDNASSRSAIQLPESPAEDGNVGQMIDKIQDKGKEFGSYVKSGKLRWFVRETGSAKSRRGTIVFLHGAPTQSFSYRVVMSQLADAGFHCFAPDWIGFGFSDKPQPGYGFNYTEKEFHDALDKLLEVLKIESPFFLVVQGFLVGSYGLTWSLKNSSKISKLAILNTPLTDSSPIPGLFQQLRFPLYGEFQCQNAIIAERFIEAGSPYVLKNEKADVYRLPYLASSGPGFALLEAARKANFKGTFSEIAEGFATNRWDKPVLLAWGLSDKYLPQSIAEEFQKGNPQNIKLKLIEGAGHMPQEDWPEKVVDAFRMFF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05601 372 PANTHER HYDROLASE ALPHA/BETA FOLD FAMILY 59 372 - -
Vifa2g05601 372 Gene3D alpha/beta hydrolase 82 372 IPR029058 -
Vifa2g05601 372 PRINTS Alpha/beta hydrolase fold signature 317 331 IPR000073 -
Vifa2g05601 372 PRINTS Alpha/beta hydrolase fold signature 144 159 IPR000073 -
Vifa2g05601 372 PRINTS Alpha/beta hydrolase fold signature 208 221 IPR000073 -
Vifa2g05601 372 MobiDBLite consensus disorder prediction 24 51 - -
Vifa2g05601 372 PRINTS Epoxide hydrolase signature 349 371 IPR000639 GO:0003824
Vifa2g05601 372 PRINTS Epoxide hydrolase signature 124 142 IPR000639 GO:0003824
Vifa2g05601 372 PRINTS Epoxide hydrolase signature 144 159 IPR000639 GO:0003824
Vifa2g05601 372 FunFam Alpha/beta-Hydrolases superfamily protein 82 372 - -
Vifa2g05601 372 SUPERFAMILY alpha/beta-Hydrolases 96 371 IPR029058 -
Vifa2g05601 372 Pfam alpha/beta hydrolase fold 119 359 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05601 Vifa-Chr2 1660451080 1660454304 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05601 - - gmx:100793646 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05601 2 1660451080 1660454304 Vifa2g05601 2 1660451080 1660454304 ECH