Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05588 ATGAACCGTCTCCTCTCCTTCCTCTTCCATCAGGGAGTATTGGATGAGCAATTCCTGCAGCTTCAGCAACTACAAGATGAGACATCACCAAACTTTGTCTCTGAGGTTGTCAACATTTATTTTCACCAGTCCGAGAAGCTTCTTAGGAATCTCAGATCATTGCTGATGGAGAGAGAGTTAATGGATTATAAGAAAATGGGGATTGATTTGAATCAGCTTATGGGTAGCAGCTCAAGCATTGGTGCAAAAAGAGTGACTAATGTTTGCGTCGCCTTTCGTGTCGCCACAGAACAAAACAACCGTGCCGGATGTTTTAGAGCATTGGAAATGCTGGAACATGAATATTGCTATCTCAAGAACAAATTGCATGAACTATTCCAAATTGAACAGCAACGTGCATTGGCAGCTGGAGTGAGGTATCCAGTACAGAATGAATAA 438 0.4224 MNRLLSFLFHQGVLDEQFLQLQQLQDETSPNFVSEVVNIYFHQSEKLLRNLRSLLMERELMDYKKMGIDLNQLMGSSSSIGAKRVTNVCVAFRVATEQNNRAGCFRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRYPVQNE 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05588 145 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 5 131 IPR036641 GO:0000160
Vifa2g05588 145 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 1 131 IPR045871 GO:0000160|GO:0009927|GO:0043424
Vifa2g05588 145 Gene3D HPT domain 1 144 IPR036641 GO:0000160
Vifa2g05588 145 FunFam Histidine-containing phosphotransfer protein 1 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05588 Vifa-Chr2 1658881960 1658882948 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05588 K14490 - gmx:100789608 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05588 2 1658881960 1658882948 Vifa2g05588 2 1658881960 1658882948 ECH
Vifa2g05588 2 1658881960 1658882948 Vifa2g05588 2 1658881960 1658882948 PCT