Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05587 ATGAATAATGAAGAGTTAGTTATTCAAGACGAGTACGTGTACAAAGAAGAGACACGACTCACAGTTATGAAAACCTCTAGATTCTTCAATGGTGATGGCTTTGTCGTGTATGATTGTAAGGGACAACTCGTTTTCCGATTCGACTCGTATGGACCTAACACTCGTGATAAGGAAGAGCTTGTTCTTATGAATCCTCACGGTCGTTCTCTTCTCACCTTGCGCCGAAAGAAAATAAGTCTACATAGACGATGGGAAGGTTTTAAAGATGACAAAAAGGAAGGAGATAAGGCAATTTTCGATGTAAGGAGATCGTCAATAATCGGACGATCACAAACAAATGTAATAGTGGAGGTACATGATAACCCAAGTATGTTGTACCTCATTGAAGGGTGTTTCTCTCAAAGATCTTGTAAGATTTTCAACACTAGAAAGAAATTAGTGGCTGAGATTCGTCGCAAGGTGGACCCCGCCACTAGTGTTATGCTTGGAAAAGAAGTGTTTGTGCTTTGTGTTCAACCTAATTTTGATGTTTCTTTTATTATGGGATTGATTTTGGTTCTTGATCGAATCAATGGTGAGAATCTCTTTGATAATGAAACTATTGAGACTTCGGTGCACCCTACTTCAGAAGATTAA 636 0.3884 MNNEELVIQDEYVYKEETRLTVMKTSRFFNGDGFVVYDCKGQLVFRFDSYGPNTRDKEELVLMNPHGRSLLTLRRKKISLHRRWEGFKDDKKEGDKAIFDVRRSSIIGRSQTNVIVEVHDNPSMLYLIEGCFSQRSCKIFNTRKKLVAEIRRKVDPATSVMLGKEVFVLCVQPNFDVSFIMGLILVLDRINGENLFDNETIETSVHPTSED 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05587 211 PANTHER - 18 191 IPR007612 -
Vifa2g05587 211 SUPERFAMILY Tubby C-terminal domain-like 6 191 IPR025659 -
Vifa2g05587 211 Gene3D - 5 195 IPR038595 -
Vifa2g05587 211 Pfam LURP-one-related 7 186 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05587 Vifa-Chr2 1658131618 1658133393 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05587 - - gmx:100783735 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05587 2 1658131618 1658133393 Vifa2g05587 2 1658131618 1658133393 ECH
Vifa2g05587 2 1658131618 1658133393 Vifa2g05587 2 1658131618 1658133393 PCT