Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05548 ATGAAGGGAAGTGTTGGAAACCCTTTGCACTTGAAATCTGTGAATCATATTTCACTCATATGCAAATCAGTTGAAGAATCAATGGATTTTTACGTGAATGTTCTTGGTTTTTTCCCAATTAGAAGGCCCGGTTCTTTTAATTTTGATGGAGCATGGCTATTTGGGTTTGGGATTGGTATTCATTTGTTGGAAGCTGAGAATCCAGAGAAATTACCAAAGAAAAAAGAAATTAATCCAAAGGATAATCACATATCTTTTCAGTGTGAGAGCATGGGAGCAGTTGAGAAAAAGCTGAAAGAAATGGAAATCGATTATGTAAGAGCAATAGTAGAAGAAGGTGGAATTCAAGTGGATCAGTTATTTTTCCATGACCCAGATGGGTTCATGATTGAGATATGCAATTGTGACAGTCTTCCTGTGATTCCACTAGCTGGTGAGGTGGCAAGATCATGCTCTCATTTGAATCTTCAACTCATGCAGAATCAGAGTCAGCAACAACAACAGATACATAAGATTGTCAAATGA 525 0.3733 MKGSVGNPLHLKSVNHISLICKSVEESMDFYVNVLGFFPIRRPGSFNFDGAWLFGFGIGIHLLEAENPEKLPKKKEINPKDNHISFQCESMGAVEKKLKEMEIDYVRAIVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVIPLAGEVARSCSHLNLQLMQNQSQQQQQIHKIVK 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05548 174 CDD VOC_like 14 132 - -
Vifa2g05548 174 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 7 134 IPR029068 -
Vifa2g05548 174 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 13 135 IPR037523 -
Vifa2g05548 174 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 132 IPR004360 -
Vifa2g05548 174 Gene3D - 4 173 IPR029068 -
Vifa2g05548 174 PANTHER - 7 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05548 Vifa-Chr2 1647351876 1647352826 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05548 - - gmx:100306100 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05548 2 1647351876 1647352826 Vifa2g05548 2 1647351876 1647352826 ECH
Vifa2g05548 2 1647351876 1647352826 Vifa2g05548 2 1647351876 1647352826 PCT