Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05509 ATGGTGGCTGTTCTTCATCCTCAAACCAGAGGGCTTCTCTCTCTCCCTGCAAACCCTAAAAGGGTTTTGGCTCAGGTTCAACCCAATTGCTTAAAGCATAGATTTTTATCACTTAAACCCGAAACCCTTGCTGTGTCTTCTTTGAATTCAAATGGGTTTTCGAAATTCAATTCCTTTTCGCCAAAAGTTAATGGCTTTGGTCAAAACGAGAAGAATTTGTTCATCTGTAAAGCAGAGGCGGCTGCTGCTGCTTCTGATGGACAAGGACAAGGAAAACCGGTTTTTGGGGAGGTTGAGGTTGAGAAAAAACCTAAAATTTTGGGGATTGAGGCACTTTTTTATACTGTCATTCTGCCTTTTATTGCTTTCTTTGGGGCTTTTGGGTTTGTTTTGTATCCTCTTAGCAATTATATTCATCCTGAGGCTTTTGCAGACAAGCTTCTTAGTGTTCTTGGTCCTAGGTTTCTTGGTCCTCTTGCAATTATCAGAATTTGGAGTTTCTGTTTGTTCTATGTTATGGCGGAATTGTGGGGGAGTGTGGTTGTTTCTGTGCTCTTTTGGGGTTTTGCTAATCAGTTACTTTTGATTTGA 591 0.4078 MVAVLHPQTRGLLSLPANPKRVLAQVQPNCLKHRFLSLKPETLAVSSLNSNGFSKFNSFSPKVNGFGQNEKNLFICKAEAAAAASDGQGQGKPVFGEVEVEKKPKILGIEALFYTVILPFIAFFGAFGFVLYPLSNYIHPEAFADKLLSVLGPRFLGPLAIIRIWSFCLFYVMAELWGSVVVSVLFWGFANQLLLI 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05509 196 PANTHER - 110 194 IPR004667 GO:0005471|GO:0006862|GO:0016020
Vifa2g05509 196 Pfam TLC ATP/ADP transporter 106 194 IPR004667 GO:0005471|GO:0006862|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05509 101 196 Organic Solute Cotransporters AT1G80300 77.083 7.84e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05509 K03301 - fve:101304200 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05509 2 1638882892 1638883697 Vifa2g05509 2 1638882892 1638883697 ECH
Vifa2g05509 2 1638882892 1638883697 Vifa2g05509 2 1638882892 1638883697 PCT