Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05504 ATGGGCTCAGAAACCTCACCACAACTTCCATTAATTGACTTCAATAACCTCAACTTAGAAACCAAAAGTCCCAATTGGGAGTTAGTGAAGTCCCAAGTTTACAAAGCACTAGTAGAGTATGGTTGTTTTGAAGCAATTTTTGATAAAGTTTCTTTAGACCTTTGCAAGGCCATATTTGATTCACTAGAAGAGCTTTTTGATCTCCCTTTACAAACCAAGCAACTCAATGTTTCTAAGGAGCCTTATCATGGTTATATTGGCCAATATCCTATGGTTCCACTTTATGAAAGCATAGGCATTGATGATGCAAATGTCTTTGAGGAAGTTAAAAGCATGACCAACCTCTTGTGGCCACATGGAAACCAAAGTTTTAGTAAAACTATACATTCATTCTGTGAAGAGCAAACAGAGTTGGATCACATTATCAGAAAGATGATTTTTGAGAGTTTAGGTGTTGAAAAGTACTTAGAGGGCACATGA 480 0.3688 MGSETSPQLPLIDFNNLNLETKSPNWELVKSQVYKALVEYGCFEAIFDKVSLDLCKAIFDSLEELFDLPLQTKQLNVSKEPYHGYIGQYPMVPLYESIGIDDANVFEEVKSMTNLLWPHGNQSFSKTIHSFCEEQTELDHIIRKMIFESLGVEKYLEGT 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05504 159 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 156 - -
Vifa2g05504 159 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 87 IPR026992 -
Vifa2g05504 159 SUPERFAMILY Clavaminate synthase-like 8 154 - -
Vifa2g05504 159 Gene3D - 1 158 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05504 Vifa-Chr2 1638237912 1638238903 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05504 - - gmx:100784444 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05504 2 1638237912 1638238903 Vifa2g05504 2 1638237912 1638238903 ECH