Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05485 ATGGATGAATGCAAAAACAATAGAGGAGAACTTCAACTTCAATCTTCTTCATTATCATTATCATCATCAAGATCAATTCAACAACAAGATTCACCTTCATTTCGAAGACGAGAAATCAAAAGTAGTAGTAATGCACTGTTTTCTTGGATTGCAAGCAACCGGTTAGTTTTGTTGCTTATCTTGATTACCCTTTGGGCTTATCTTAGTTTTTTTGTTCAATCTAAATGGGATGATTATGATAAACAACAACAACAAATTAAACGGTTTGATTTTCATCTTAGTAATCCTCAAGATTTTGTTGTCAAAAAGAGTTCTTTATTTAATCATAATGAAAAAGTTGTTGTTTTGGCCAAGAAAGAAGAAAATGGTAAAAGTACTTCAAAGAAAAAGAAAAGCAGAAGATCTTTGAGAAGTGAGGTTAATGATAAGCAGAAAAGAAGATTCAAAGTTGAAAAGGAGTTAGAGAAGTTTCCTCTTGTGGGTCCATTTGGCTTATTAGAGGGTAGGATATTGAAATTGAGTAGTACTAATAGTGAGAAGTGTTGTGGAAAATGTGAAAGGAAAAGTGATTTTGCAAAAGCTGTTTTGTCAAAGAGATTTGTGTTAATATTTCATGAGCTTTCTATGACTGGTGCACCGCTTTCAATGATGGAATTGGCAACTGAAATGATGAGATGTGGAGGAAATGTTTCAGCTGTTGTTCTTAGTAAAAAAGGTGGTTTGATGGAAGAGCTTATTAGGAGAAAAATTAAGGTGGTTGATGATAAAGTTGTTCATAGCTTCAAAGCTGCTTTGAGTGCTGATCTTGTCGTTGCTGGTTCAGCTGTTTGTTCTTCATGGATTGAACAATACATTGAATATTTTCCTTATGCTGCAAATCATATTGTTTGGTGGATTATGGAAAACCGAAGAGAGTACTTCGACCGATCAAAACACGTCTTGAACAAAGTGAAGATGTTGGTTTTTATTTCCGAATCACAATCCAATAAATGGCGAAAATGGTGTGAAGAAGAAAGCGTAAGACTCAGATTCCACCCTGCAATTGTCCCACTGTCTGTTAATGATGAACTTGCTTTCGCAGCCGGAGTTCATTCCTCGAGCGCTTCCGCGAAAATCGACGAGAAGAGGAAGCTCTTGCGCGAATCGGTCCGAAGAGAAATAGGTTTGAATGATAATGATATGCTTGTGATATCTCTAAGTAGCATCAATCCTGGAAAGGGTCAGCTACTGTTTCTCGAATCAGCAAACAAAATAGTCGAAAATGAATCATCGCAAAATTCATCGGAAGTTACTTGGGATAGAAGGCATCATATTAGAAAGTTGTTGCCAATGTTGAAGAATGAAAAAATGAAACAATCTCTGAAAGTTGTGATTGGATCTGTTGGATCAAAGAGTAACAAGGTGAAATATGTCAAGAGTATCGCAAGTTTCTTGTCACAACATTCGAATTTGTCGAAGAATGTTTTGTGGACTCCAGCTTCTACACATGTTGCCTCACTTTACTCTGCTGCTGATGTTTATGTCATAAACTCTCAGGGATTAGGAGAAACGTTCGGACGTGTGACGATCGAAGCAATGGCATTTGGTCTTCCGGTGTTAGGAACAGAAGCTGGAGGGACAAAAGAGATTGTGGAGCATGGTGTGAGTGGTCTTCATCATCCTATTGGACGTAAAGGGAATCATGTTCTTGCAAAAAATCTACGGTTTTTACTTGAAAATCGATTTGCAAGAGAGAAAATGGGAATGAATGGAAGAAAGAAAGTGGAAAGAATGTATATGAAGCAACATATGTATAGAAAATTTGTAGAGGTTCTTGTTAGGTGCATGAGAAGCAAATAA 1839 0.3676 MDECKNNRGELQLQSSSLSLSSSRSIQQQDSPSFRRREIKSSSNALFSWIASNRLVLLLILITLWAYLSFFVQSKWDDYDKQQQQIKRFDFHLSNPQDFVVKKSSLFNHNEKVVVLAKKEENGKSTSKKKKSRRSLRSEVNDKQKRRFKVEKELEKFPLVGPFGLLEGRILKLSSTNSEKCCGKCERKSDFAKAVLSKRFVLIFHELSMTGAPLSMMELATEMMRCGGNVSAVVLSKKGGLMEELIRRKIKVVDDKVVHSFKAALSADLVVAGSAVCSSWIEQYIEYFPYAANHIVWWIMENRREYFDRSKHVLNKVKMLVFISESQSNKWRKWCEEESVRLRFHPAIVPLSVNDELAFAAGVHSSSASAKIDEKRKLLRESVRREIGLNDNDMLVISLSSINPGKGQLLFLESANKIVENESSQNSSEVTWDRRHHIRKLLPMLKNEKMKQSLKVVIGSVGSKSNKVKYVKSIASFLSQHSNLSKNVLWTPASTHVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTEAGGTKEIVEHGVSGLHHPIGRKGNHVLAKNLRFLLENRFAREKMGMNGRKKVERMYMKQHMYRKFVEVLVRCMRSK 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05485 612 CDD GT4_PimA-like 199 605 - -
Vifa2g05485 612 PANTHER BNAA05G14870D PROTEIN 13 428 - -
Vifa2g05485 612 Pfam Glycosyl-transferase family 4 197 365 IPR041693 -
Vifa2g05485 612 MobiDBLite consensus disorder prediction 119 143 - -
Vifa2g05485 612 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 204 605 - -
Vifa2g05485 612 Gene3D Glycogen Phosphorylase B; 367 592 - -
Vifa2g05485 612 MobiDBLite consensus disorder prediction 14 34 - -
Vifa2g05485 612 Pfam Glycosyl transferases group 1 382 586 IPR001296 GO:0016757
Vifa2g05485 612 MobiDBLite consensus disorder prediction 14 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05485 Vifa-Chr2 1632074292 1632076510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05485 11 610 Glycosyltransferase AT3G15940 51.079 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05485 - - cam:101493983 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05485 2 1632074292 1632076510 Vifa2g05485 2 1632074292 1632076510 ECH