Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05453 ATGAGCATGCCGAAACCTAATCAAGTAGCAGTTAGAGACCTCGTTGAGGAAGCGAAGAAACGGATTGTGATTCTCATCGTTTGCGTTGTTGGACTCTCCTATCTCATGTCATTGACAAGCTCCTCAGTTTGGGTCAACTTACCTGCTGCAGCTTCCTTAATTGTCATTTTCCGTTATTTATCACTGGATTATGAAATGAAGAGAAAAGCTGCAGCATACAACAATAAAGCAAGCTCCACCAGTATTCAGTCTTCGAAGAAGCCTACCGAAAATCCTAAAGCAGTTGCAAAATTTGAGTGGCGAGCAAAAGTGAATTCACCTGTTGTTGAGGATGCAATTGATCACTTCACTAGACATCTGGTTTCTGAGTGGGTAACAGATCTTTGGTACTCTCGCTTAACACCGGACAAAGAGGCTCCTGAGGAGTTGGTGCAACTAATTAATGGTGTACTTGGTGAAATTTCAGGACGCATGAGAAATATAAATCTGATTGATTTTTTGATAAGGGATCTTGTTAATCTCATTTGCACTCATTTGGAGCTGTTCCGTGCTTCTATCTCCAAGATTGAAAAACAACAGTCAGGTTCATTAACAATTGAAAGTCGAGATACGGAACTAAAAATTGTGTTGGCTGCAGAAAACAAATTACATCCTGCTTTATTCTCTTCTGAAGCTGAGCACAAGGTTTTGCAGCATCTGATGAGTGGTCTTATGTCCGCCACTTTCAAGTCGGAGGATTTGCAGTGTTCTTTCTTTCGATATACTGTCAGGGAGCTTCTTGCATGTACTGTAATACGACCTGTTCTAAATTTAGCCAATCCAAGATTTATTAATGAAAGAATTGAGTCTGTGGTAATTAATAAGACCAAGACTAACAAGGGGGTTGATGCAGCTCAAGGGGTATCCCACACTAAAGCAGATGAGCCACAAACTTCATCTGACCATTTTTCCAAGTGTTTAGATCCTTCCGTTACTGGTGTTGAGCTTACACAGCTAAAGAACAGTCAATCCAGAAATGCAGAGACACCTGCTGAAAGGAATGCTTCTGATAACCTTGCTAGGGACCCGTTGCTTTCAATTGATACTCGATCTTCCCGTTCATGGAACTCTTTACCTGGAAACTCTCAAAGTAATGGTGACCAAGGTATTCAACGATATCACTCTGGAGGAGAGTGGGGAGATATTTTAGATGTCGTCTCTCGTAGAAAGACCCAAACTCTTGCTCCAGAACATTTTGAGAATGTGTGGGCAAAGGGAAAAAATTACAAGAAAAAGGATGGGGAGAACCAATCGAATGAACGAGTCCCACAACATCCCCCAATAGGAAAATCACCCAAGGTAAATCATATTAAGGCAATATCTGGACCAAAAGAAAAAGACAAAAATGGATCAACTCGTTCTTCAGTTACCTCGTATAAAGATGATGAGCACAACCACATTAATATGCATACGACTGAATCAGAGAGCAATACGTCTTACACTTCTGAAGATGATGAAACTAGTAATGTTACAGGTCTTGATTCCCCTGGAACTAAGGTTTGGGATGGAAGAAGTATCAGAAACCAGGCTGTTTCTTATGTTCATCACCCACTTGAAAGTTTTGATAACCACAGTACAAAGAAAAGGAATAAGAACCGTTCCCGCTACCCGAGATCATTCAGAAGTCAGTCTGGCAGTAAAAGGTCTAGATCAAGCGATCAAAAGACACAGATGTGGCAGGAAGTTGAGAGATCAAGTTTTTTATCTGGTGATGGTCAAGACATACTCGGCTCTTCAAAATCACTTGTGAATTCTGACGAGTCCTCCGATGAGGTCGATTTTGAAAGTTTGGGTAGAATTTATAGTGGAGCAGCCGCCTCTTCTTCATCCTCTATATCCAAACCAGAATCTTGTAGTTTGGCTGTTAATCCTCTGATAAGTTCTTCTTCCGTTGATTCCTTTTACAAGTTGAGATGTGAGGTCTTGGGTGCAAACATTGTGAAGAGTGGTTCAAGAACATTTGCCGTTTACTCCATATCTGTTACAGATGTAAATAATAACAGTTGGTCAATTAAAAGAAGGTTTCGTCATTTTGAAGAGCTGCATCGGCGCCTGAAAGAGTTCCCTGAGTATAATCTTCATTTGCCACCAAAACATTTTCTGTCAACTGGTTTAGATGTAGCAGTCATTCAAGAGCGGTGTGAATTGCTTGATAAATATTTGAAGAAACTTATGCAGCTACCTAAAGTTTCAGAATCAATTGAATTATGGGACTTCCTGAGTGTTGATTCTCAGACCTACATATTCTCAAATTCTTTTTCTATCATGGAAACATTACCAGTTGGCCTGGACTCTAAGTCACCTGAGAAGACTAAAATCAGTTCCACTGTTTCTGCATCCGGAAGTGGCCCTTTTGCCTTTCAGAGGGAAAACCATAGTTCTGAAAGTAAAGAGGCTGTTTTGCGAAGAAGAAATAATGCTGTGGATAATGGATTAAGGCCAAAATTAAATAACATGCCTCTTTCTCTACCGACAAAAAAGAATACACAAGAATCTAGACAGTCATTTGACAATTCTGGAAGCAATGCAGATATTCTAGCTCGGAAGAGTGCACCTTCTCCCAATAACCCGCAGAAGTTAGTGAAAGGAAGAGATAGGTCAGATGAGGTCTCTGATGTGAACCGTGATACTGCTGACACTTTTCCAACAGAGTGGGTGCCACCAAATTTAAGTGTACCCATATTGGATCTCGTTGATGTTATCTTCCAGCTGCAAGACGGTGGATGGATTAGGAGGCAAGCTTTCTGGGTTGCAAAACAAGTCTTACAACTAGGGATGGGCGATGCCTTAGATGATTGGTTGTTAGAGAAAATTCTGCTTCTCCGAAAGGGATCAGTGATTGCTTCAGGAGTCACACGAGTTGAGCAAATACTCTGGCCTGATGGAATTTTCTTAACCAAGCATCCAAATAGACGACCACCGCCTACCAGTCCATCTCAGAATTCACCCAATGGCCATCAACCTTCACCAGTATCTTCTCCAAGGATGGAAGATGAGCAAGCAGAGGCAGATCGCCGCGCAAAGTTTGTATACGAGCTAATGATTGATCAAGCACCACCGGCAATTGTAGGTCTTGTTGGAAAGAAGGAATATGAACAATGTGCCAGGGATCTTTATTTTTTCCTTCAGTCATCTGTTTGCTTGAAACTGCTGGCTTTTGACCTCCTGGAGATGCTGCTTTTGTCAGCATTTCCAGAACTTGACGATGTATTCAAGCAGCTGCATGATGAAAAGCATAAATTTGGTGAACTCGTAAAGTAA 3300 0.4124 MSMPKPNQVAVRDLVEEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLIVIFRYLSLDYEMKRKAAAYNNKASSTSIQSSKKPTENPKAVAKFEWRAKVNSPVVEDAIDHFTRHLVSEWVTDLWYSRLTPDKEAPEELVQLINGVLGEISGRMRNINLIDFLIRDLVNLICTHLELFRASISKIEKQQSGSLTIESRDTELKIVLAAENKLHPALFSSEAEHKVLQHLMSGLMSATFKSEDLQCSFFRYTVRELLACTVIRPVLNLANPRFINERIESVVINKTKTNKGVDAAQGVSHTKADEPQTSSDHFSKCLDPSVTGVELTQLKNSQSRNAETPAERNASDNLARDPLLSIDTRSSRSWNSLPGNSQSNGDQGIQRYHSGGEWGDILDVVSRRKTQTLAPEHFENVWAKGKNYKKKDGENQSNERVPQHPPIGKSPKVNHIKAISGPKEKDKNGSTRSSVTSYKDDEHNHINMHTTESESNTSYTSEDDETSNVTGLDSPGTKVWDGRSIRNQAVSYVHHPLESFDNHSTKKRNKNRSRYPRSFRSQSGSKRSRSSDQKTQMWQEVERSSFLSGDGQDILGSSKSLVNSDESSDEVDFESLGRIYSGAAASSSSSISKPESCSLAVNPLISSSSVDSFYKLRCEVLGANIVKSGSRTFAVYSISVTDVNNNSWSIKRRFRHFEELHRRLKEFPEYNLHLPPKHFLSTGLDVAVIQERCELLDKYLKKLMQLPKVSESIELWDFLSVDSQTYIFSNSFSIMETLPVGLDSKSPEKTKISSTVSASGSGPFAFQRENHSSESKEAVLRRRNNAVDNGLRPKLNNMPLSLPTKKNTQESRQSFDNSGSNADILARKSAPSPNNPQKLVKGRDRSDEVSDVNRDTADTFPTEWVPPNLSVPILDLVDVIFQLQDGGWIRRQAFWVAKQVLQLGMGDALDDWLLEKILLLRKGSVIASGVTRVEQILWPDGIFLTKHPNRRPPPTSPSQNSPNGHQPSPVSSPRMEDEQAEADRRAKFVYELMIDQAPPAIVGLVGKKEYEQCARDLYFFLQSSVCLKLLAFDLLEMLLLSAFPELDDVFKQLHDEKHKFGELVK 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05453 1099 MobiDBLite consensus disorder prediction 874 888 - -
Vifa2g05453 1099 Pfam PX domain 679 756 IPR001683 GO:0035091
Vifa2g05453 1099 SMART PXA_3 101 289 IPR003114 -
Vifa2g05453 1099 MobiDBLite consensus disorder prediction 332 388 - -
Vifa2g05453 1099 MobiDBLite consensus disorder prediction 452 483 - -
Vifa2g05453 1099 CDD PX_SNX19_like_plant 650 754 - -
Vifa2g05453 1099 Pfam Sorting nexin C terminal 922 1058 IPR013937 -
Vifa2g05453 1099 MobiDBLite consensus disorder prediction 420 516 - -
Vifa2g05453 1099 MobiDBLite consensus disorder prediction 781 803 - -
Vifa2g05453 1099 Pfam PXA domain 106 283 IPR003114 -
Vifa2g05453 1099 MobiDBLite consensus disorder prediction 530 572 - -
Vifa2g05453 1099 Gene3D - 648 764 IPR036871 GO:0035091
Vifa2g05453 1099 MobiDBLite consensus disorder prediction 332 346 - -
Vifa2g05453 1099 MobiDBLite consensus disorder prediction 981 1012 - -
Vifa2g05453 1099 ProSiteProfiles PX domain profile. 648 760 IPR001683 GO:0035091
Vifa2g05453 1099 MobiDBLite consensus disorder prediction 834 870 - -
Vifa2g05453 1099 MobiDBLite consensus disorder prediction 484 508 - -
Vifa2g05453 1099 SMART PX_2 652 756 IPR001683 GO:0035091
Vifa2g05453 1099 SUPERFAMILY PX domain 649 757 IPR036871 GO:0035091
Vifa2g05453 1099 MobiDBLite consensus disorder prediction 777 893 - -
Vifa2g05453 1099 PANTHER PX SERINE/THREONINE KINASE PXK 102 1095 - -
Vifa2g05453 1099 MobiDBLite consensus disorder prediction 550 572 - -
Vifa2g05453 1099 MobiDBLite consensus disorder prediction 296 318 - -
Vifa2g05453 1099 ProSiteProfiles PXA domain profile. 106 285 IPR003114 -
Vifa2g05453 1099 MobiDBLite consensus disorder prediction 358 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05453 Vifa-Chr2 1623678650 1623689867 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05453 K17925 - gmx:100790491 1661.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05453 2 1623678650 1623689867 Vifa2g05453 2 1623678650 1623689867 ECH