Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05448 ATGGTTAGAGCAATTGAACAAGAACAGGAAACTTATAAATCCAAATTATTCCATTTTAAAGGAATGTTTGAGAATACAGGGAGGCATACAAAAAGCTTAAGCATTGAAAGTGCTAGCACATTAGATCCTATTTCAGATGATGATCCTGTTTCATCAAGAAGTCAAGGATCAAAACCTCTTCAACAAGATCCTCTTCCTAACAAGTCAAAAACAATCAAGGATGAAATTGCAGCCAAAGAAGCCAAAGAGAAGCTATTACTAGAAATGGAACAGATGAAGGAGAGATTTGCTAAACTACTATTGGGAGAGGATATGTCTGGTGGAGGAAAAGGTGTTTCTTCAGCTTTGGCATTGTCAAATGCATTAACAAATCTTGCTGCTGCTGTTTTCGGTGAACAAAAGCGTCTCGAGCCAATGGCGACCGAAAGGAAAGCGAGATGGAGAAAAGAAATCGATTGGCTTCTTTCGGTCACTGATTACGTCGTGGAAATGGTTCCAACACAACAGAAAGGCAAGGATGGTTCAAGCATGGAGATTATGACGACGCGACAACGAACAGATCTACACATGAATATTCCTGCCTTGAGAAAGCTTGATACAATGCTTATTGATTGTCTTGATAACTTCAAAGACCAAACTGAATTCTATTACGTATCGAAAGATGCCGATGATCCAGATAGGTCAAAAGGTAAAAATGAGGACAAGTGGTGGTTACCAACGCCTAAAGTACCTGTAGATGGTTTATCTGATACAGCAAGAAGGTTTTTGCAGTATCAGAAAGATTGTGTGAATCAAGTACTTAAAGCAGCCATGGCTATAAATGCTCAAACTCTATCAGAAATGGAGATTCCTGAAAGCTATATCGAATCCCTACCTAAGAACGGAAGAGCAAGTCTAGGTGACTTAATCTACCGGAATATTACAGATGAATTCTTCGATCCTGATCAGTTCCTAGCGACAGTGGACATGTCATCGGAACACAAAATTCTAGACCTTAAGAACAGAATTGAGGCATCAATAGTGATTTGGAAGAGGAAAATGAACCAAAAAGATACCAAATCAGCATGGGGTTCTGCAGTGAGTATTGAGAAAAGAGAACTCTTTGAAGAGAGGGCAGAAACTATCTTACTTCTCTTAAAGCATAGATTTCCAGGGCTTCCACAATCTTCTTTAGATATAAGCAAAATCCAATTCAACAGAGATGTAGGGCAAGCTGTTCTTGAAAGTTATTCAAGAATTTTGGAAAGTTTAGCCTTTACGGTACTGTCAAGAATCGAAGATGTTCTCCACGCAGATTGTCAAACAGTTAGTCCGTCACAAGGAAGAAAAAGCAGTGTAAGAAATCCAGTTCCAAAGCCAGACAAGTGTCCAACACCAAGAGAAGGGGTCGACAAGAGCATCAGCACAGAACCACTTTGTTCGATGACACTATCGGATTTCATGGGTTGGAACAACGAGCAAGGTGAATCAGACATGAATAAAAAGGATCCCCTTGCTGCTTCAGATGATTCGGACAAAGATATTGATAGTGGAAAGCTTAGCAAACTTCCAACTATAGTGACCGATAAGAAAGTGTCCTACCTTGAGAACATAGGAGGCATGAGAAGTCCAACATCACGCCATTGA 1626 0.3998 MVRAIEQEQETYKSKLFHFKGMFENTGRHTKSLSIESASTLDPISDDDPVSSRSQGSKPLQQDPLPNKSKTIKDEIAAKEAKEKLLLEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNALTNLAAAVFGEQKRLEPMATERKARWRKEIDWLLSVTDYVVEMVPTQQKGKDGSSMEIMTTRQRTDLHMNIPALRKLDTMLIDCLDNFKDQTEFYYVSKDADDPDRSKGKNEDKWWLPTPKVPVDGLSDTARRFLQYQKDCVNQVLKAAMAINAQTLSEMEIPESYIESLPKNGRASLGDLIYRNITDEFFDPDQFLATVDMSSEHKILDLKNRIEASIVIWKRKMNQKDTKSAWGSAVSIEKRELFEERAETILLLLKHRFPGLPQSSLDISKIQFNRDVGQAVLESYSRILESLAFTVLSRIEDVLHADCQTVSPSQGRKSSVRNPVPKPDKCPTPREGVDKSISTEPLCSMTLSDFMGWNNEQGESDMNKKDPLAASDDSDKDIDSGKLSKLPTIVTDKKVSYLENIGGMRSPTSRH 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05448 541 Gene3D PRONE domain, subdomain 1 93 432 - -
Vifa2g05448 541 FunFam Rop guanine nucleotide exchange factor 14 81 312 - -
Vifa2g05448 541 ProSiteProfiles PRONE domain profile. 79 442 IPR005512 GO:0005085
Vifa2g05448 541 FunFam Rop guanine nucleotide exchange factor 14 314 440 - -
Vifa2g05448 541 Coils Coil 75 95 - -
Vifa2g05448 541 Gene3D PRONE domain, subdomain 2 282 398 - -
Vifa2g05448 541 MobiDBLite consensus disorder prediction 489 512 - -
Vifa2g05448 541 FunFam Rop guanine nucleotide exchange factor 9 282 398 - -
Vifa2g05448 541 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 88 434 IPR005512 GO:0005085
Vifa2g05448 541 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 35 494 IPR038937 GO:0005085
Vifa2g05448 541 MobiDBLite consensus disorder prediction 436 468 - -
Vifa2g05448 541 MobiDBLite consensus disorder prediction 39 72 - -
Vifa2g05448 541 MobiDBLite consensus disorder prediction 39 67 - -
Vifa2g05448 541 MobiDBLite consensus disorder prediction 483 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05448 Vifa-Chr2 1622329126 1622331303 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05448 - - gmx:100777496 802.742