Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05384 ATGGCGCAAAACCTTCTCAACGAGGAGAATAATATTCTTAAGCAATTGAGAGATGGTACAGCAAAATTTGAGATTGTTTCTTCCCCACTTCCTTCCATTGTTTCGAACACAACCTTCTTCGGAGCTGGAAGTTCTAGCAGTCTCTTTTTCGCTAGAATTGGTTCATCCATTGGTGGACAGTCTGCAGCAATGAAGAAGCTTGAACGTTTTTCAGTTCACAAGGTCACAGGGGATGGGCGGTGTCTCTTTCGTGCACTGGTAAAAGGAATGGCTTACAACAAAGGAGTTGCTCTTAACCAACGCGAGGAGAGAGAAAATGCAGATGAATTAAGAATGGCAGTCAAAGAAGCTATATGTGAAAATGTAGGAGATCGTAAGTTATATGAAGAAGCCATCATTGCTGTCACGGTTGACGAGCCTTTGCAACGTTACTGCAGGCGGATTGTACAACCAGATTTCTGGGGAGGAGAATCAGAACTGTTGGTATTATCAAAGTTATGTAAGCAACCAATTATTGTGTACATACCGGAGCATGAGCATAGAGGTGGTGGCCGGGGATCTGGTTTTATTCCCATTGCAGAGTATGGAAGTGAGTTTATAAAGGGTTCTAGCAGAAAAGCTGTGAGGCTGTTGTTTAGCGGTAAGAACCATTATGATCTTCTGTTATAA 669 0.426 MAQNLLNEENNILKQLRDGTAKFEIVSSPLPSIVSNTTFFGAGSSSSLFFARIGSSIGGQSAAMKKLERFSVHKVTGDGRCLFRALVKGMAYNKGVALNQREERENADELRMAVKEAICENVGDRKLYEEAIIAVTVDEPLQRYCRRIVQPDFWGGESELLVLSKLCKQPIIVYIPEHEHRGGGRGSGFIPIAEYGSEFIKGSSRKAVRLLFSGKNHYDLLL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05384 222 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 55 221 - -
Vifa2g05384 222 SUPERFAMILY Cysteine proteinases 69 221 IPR038765 -
Vifa2g05384 222 FunFam Cysteine proteinases superfamily protein 49 222 - -
Vifa2g05384 222 Gene3D - 46 222 - -
Vifa2g05384 222 Coils Coil 100 120 - -
Vifa2g05384 222 CDD OTU_plant_OTU3-like 68 222 - -
Vifa2g05384 222 ProSiteProfiles OTU domain profile. 70 222 IPR003323 -
Vifa2g05384 222 Pfam OTU-like cysteine protease 76 178 IPR003323 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05384 - - gmx:100807522 343.199