Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05365 ATGAACTCTTCTCTCTCTATAAATTCCTCTCTCTCTCCTCCTTTTCTCTCACCTCACTCCACCACCCTTTCTTCATCTTGTTCTTATTCTCATTCCTATTCCTCCTATTTCAATCCTCAAACTTCTATTAGATTTACAACTTTTCCACCACAACCCATTACACCCTTTTGCAAAAAGGTTCGATTTTGGAACTTTGAAGGGTTTGAGAGTGTGAAGAGACGAAAAAGTTTGAAGCTTGAAGCTACTACAAAAATGACCATTGATGAAGAGAGTTTGTTGAATGTTAGAGATGAAGAAGAGGGTCCACCTGACTCTGTTTTGAATGATCATGAGAGTAATTCTAAACCTCGTAGAATTGCTTTGTTTGTTGAGCCTTCTCCTTTTTCATATGTCTCGGGATACAAGAATCGTTTTCAGAATTTTATAAAGTACCTCAGAGAAATGGGAGATGAGGTCTTGGTTGTAACAACACATGAAGGAGTACCTAAGGAATTTTATGGAGCACAACTAATTGGATCCAAAAGCTTCCCTTTTCCTTGGTATCAGAAGGTACCACTCTCTTTGGCACTTAGTCCAAGAATAATTTCAGCTGTTGCTCAATTTAAGCCCGACATAATTCATGCTTCATCACCCGGAATAATGGTTTTTGGTGCTCTTATCATTGCAAAGCTTCTGTCTGTTCCTATTGTCATGTCCTATCATACTCATGTACCAGTATACATTCCAAGATACACATTTAGCTGGCTAGTGCAACCAATGTGGTTGGTTCTAAAGTTTCTGCACCGAGCAGCCGATCTAACTCTAGTGCCATCAGCTGCCATTGCGAGGGATCTTGAAGAAGCTAGAGTAACAGCAGCTAACAAGATCCGTCTTTGGAACAAGGGTGTTGATTCGGAAAGCTTCAATCCACGATACAAGTCACATGAAATGCGATTGAGACTGAGCAATGGTGAACCGGAGAAGCCCTTAATTGTTCATGTCGGACGACTTGGAGTTGAGAAGAGTTTAGATTTTCTCAAAAGTGTCATGGATAAGCTTCCTGAAGCACGAATCGCTTTTATTGGAGATGGACCTTACAGGGAGGAGTTGGAGAAAATGTTTGAAGGGATGCCAGCAGTATTCACAGGAATGTTATCAGGGGAAGAACTATCTCAAACATACGCCAGCGGCGATGTCTTTGTTATGCCATCAGAGTCGGAGACACTTGGTCAAGTTGTTTTGGAAGCCCTGTCTTCTGGGATTCCTGTCGTTGGAGCACGTGCCGGTGGAGTTCCAGACATAATCCCTGAAGATCAAGAAGGCAAAATCGGATACCTATACACTCCAGGTGATCTCGACGATTGCTTGAGCAAACTAGTACCTCTGTTACACGACAAAGAGTTGAGAGAAACGATGGGAAAAGCCGCACGTATAGAGATGGAGAAATACGATTGGAGGGAAGCAACTAGAACGATTCGCAACAACAATTACAACGCCGCGATTTGGTTCTGGCGCAAGAAAAAGGCTCAACTATTGCTACCGTTCCAATGGCTAACGAAACTTGTTTTCCCGTCAGAAGTTGTAATAGATAATGGAAAACCGACCCCGGCAGAAGTTGTAATAGATAATGGAAAACCGACCGTATAA 1626 0.4225 MNSSLSINSSLSPPFLSPHSTTLSSSCSYSHSYSSYFNPQTSIRFTTFPPQPITPFCKKVRFWNFEGFESVKRRKSLKLEATTKMTIDEESLLNVRDEEEGPPDSVLNDHESNSKPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVLVVTTHEGVPKEFYGAQLIGSKSFPFPWYQKVPLSLALSPRIISAVAQFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVQPMWLVLKFLHRAADLTLVPSAAIARDLEEARVTAANKIRLWNKGVDSESFNPRYKSHEMRLRLSNGEPEKPLIVHVGRLGVEKSLDFLKSVMDKLPEARIAFIGDGPYREELEKMFEGMPAVFTGMLSGEELSQTYASGDVFVMPSESETLGQVVLEALSSGIPVVGARAGGVPDIIPEDQEGKIGYLYTPGDLDDCLSKLVPLLHDKELRETMGKAARIEMEKYDWREATRTIRNNNYNAAIWFWRKKKAQLLLPFQWLTKLVFPSEVVIDNGKPTPAEVVIDNGKPTV 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05365 541 CDD GT4-like 118 483 - -
Vifa2g05365 541 Pfam Glycosyltransferase Family 4 136 299 IPR028098 -
Vifa2g05365 541 Gene3D Glycogen Phosphorylase B; 296 476 - -
Vifa2g05365 541 Pfam Glycosyl transferases group 1 319 470 IPR001296 GO:0016757
Vifa2g05365 541 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 119 485 - -
Vifa2g05365 541 Gene3D Glycogen Phosphorylase B; 132 480 - -
Vifa2g05365 541 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 113 501 - -
Vifa2g05365 541 FunFam Sulfoquinovosyl transferase SQD2 118 313 - -
Vifa2g05365 541 FunFam sulfoquinovosyl transferase SQD2 314 476 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05365 88 439 Glycosyltransferase AT5G01220 78.977 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05365 K06119 - gmx:100780899 822.002