Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05290 ATGGCCCAGATGATGAAAAACACAATTCCATGGCCAACAATCATGGTAGTGATTTCATGGTACACTTCAAACATTGGTGTTCTTCTCATGAACAAATACTTGTTAACAAACTACGGTTACAAGTACCCTGTTTTTCTCACCATGTGTCACATGATGTTGTGTTCTATTTTCAGCTACGTTGGTATTTCAGTTTTGGATATTGTACCTTTGCAAAGTGTTCAATCCAAGAACCAGTTGTTCAAAATCTGTGGATTGAGTGTTGTGTTTTGTTTCTCAGTGGTTTGTGGCAACGTGTCGCTTAATTATATTCCAGTGTCGTTTAATCAAGCTATTGGAGCTACGACACCGTTTTTTACTGCCGTTTTTGCTTATGTTGTTAGTAGAAAAAGAGAAGCTTGGGTCACTTATTGCACCCTCTTGCCTGTTGTGGCTGGTGTCATCATTGCTAGTGGGAGTGAACCGAGTTTTCATCTATTTGAATTTATAATATGTGTTGCATCAACCGCTGCAAGAGCATTTAAATCAGTGCTTCAAGCTATTTTGTTGTCATCAGAAGGAGAAAAGTTGAATTCAATGAACCTGCTACTTTATATGGCACCTATAGCAATGTTGGTGCTACTTCCTGCAACATTGTTAATGGAGGGAAACGTGATTCGGATTACGATAGAACTTGCTAGAGAGGATTTCAGAATTGTTTGGTATCTGCTATTGAGTTCTTCTCTTGCATATTTTGTGAACCTCACTAATTTTTTGGTGACCAAATATACAAGTGCACTCACCCTTCAAGTGTTAGGAAATGCAAAGGGGGCAGTTGCTGTGGTGATTTCAATTTTGATATTTCAAAATCCTATTTCAATGATAGGAATGCTTGGCTATGTACTTACTATCATAGGAGTTATATTGTATAGTGAAACCAAGAAGAGATATACTTAG 933 0.3773 MAQMMKNTIPWPTIMVVISWYTSNIGVLLMNKYLLTNYGYKYPVFLTMCHMMLCSIFSYVGISVLDIVPLQSVQSKNQLFKICGLSVVFCFSVVCGNVSLNYIPVSFNQAIGATTPFFTAVFAYVVSRKREAWVTYCTLLPVVAGVIIASGSEPSFHLFEFIICVASTAARAFKSVLQAILLSSEGEKLNSMNLLLYMAPIAMLVLLPATLLMEGNVIRITIELAREDFRIVWYLLLSSSLAYFVNLTNFLVTKYTSALTLQVLGNAKGAVAVVISILIFQNPISMIGMLGYVLTIIGVILYSETKKRYT 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05290 310 SUPERFAMILY Multidrug resistance efflux transporter EmrE 74 152 - -
Vifa2g05290 310 SUPERFAMILY Multidrug resistance efflux transporter EmrE 201 303 - -
Vifa2g05290 310 PANTHER SOLUTE CARRIER FAMILY 35 14 306 - -
Vifa2g05290 310 Pfam Triose-phosphate Transporter family 15 303 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05290 Vifa-Chr2 1573096040 1573097954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05290 13 308 Organic Solute Cotransporters AT3G11320 75.676 2.15e-167 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05290 - - gmx:100799632 503.827