Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05254 ATGAAAGCGTTTCTTATGCTCCAGCTATGGAATCCACCACCACGCTTCCACAAGAGAAGGCGCCTAAGAAACGAGCGAAGAGAGAGCAAGAACACAACCAATTGGAGGGAAGAAGTAGAAGATACGCTCAGCAAGAAGACTAAGAAGGAGTTTAAGTCATGGATGGATGAACTGAACCTTGATAATCTCATGAAGTTGGGTCCTCAATGGTGGATCGTTCGTGTTTCGCGTGTTAAGGGTCAGTATACTGCTGAAGCGCTTGCTCGTTCGTTGGCCAAGTTTTTCCCTGATACGGACTTTAAGGTATATGCTCCAGCTATCCGTGAAAAAAGGAAACTGAAAAATGAGTATGATGGTGTTGGTGGCTTTATTGGATCCAAGGTTGGAAATACAAAGAGAATGATTAATAAACCAAAGCCAGTATCTGAGTACGATATGGAAGCAATCTTCAGACAGGCAAAAGTGGAGCAAGAAAATGCTGACAAGGCATTCGAGGAAGAACAAAAAAAATCTGCCGAAATCTCTGTGAAACCGAATTCAGAGATAGAATCAGATGTTTCAAAAGCTATAGTTGATTCTAAGCCTGAAAAGAGGCTCTAG 600 0.4233 MKAFLMLQLWNPPPRFHKRRRLRNERRESKNTTNWREEVEDTLSKKTKKEFKSWMDELNLDNLMKLGPQWWIVRVSRVKGQYTAEALARSLAKFFPDTDFKVYAPAIREKRKLKNEYDGVGGFIGSKVGNTKRMINKPKPVSEYDMEAIFRQAKVEQENADKAFEEEQKKSAEISVKPNSEIESDVSKAIVDSKPEKRL 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05254 199 MobiDBLite consensus disorder prediction 159 176 - -
Vifa2g05254 199 PANTHER RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSG 18 115 IPR043425 -
Vifa2g05254 199 Coils Coil 155 175 - -
Vifa2g05254 199 MobiDBLite consensus disorder prediction 159 199 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05254 - - lja:Lj0g3v0333779.1 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05254 2 1566028301 1566031077 Vifa2g05254 2 1566028301 1566031077 ECH