Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05116 ATGAAGCTCGTTTGGTCTCCAGAAACTGCCTTGAAATCATACATAGATACTGTGAAGTTGAAATCCGTAAGTAACTTTCAACCTCAACAACAATGTGAAAAGTGCAAGGAATCTGGGGTAGCTGAGCTTCTATCATCCATGGCAGCCGGATGGAACTCAAAGTTCATCGTAGAATGTTACTCTCACGGTGGCCCGATAGCCGCAAGTATAGGCCTAGCGGTTGCTGCTCGCAACACGGGTGCAAGGCATGTATGCATAGTCCCAGATGAAGGTACAAGACTACACTACACAAAAGCCCTAGCCGAGATGGGAGTATCGCCTCCACCGGAGATAGTTCGCGGTGAGGCCGAGACGGTGATCAAAAGCCTCGACGGGTTGGATTTTCTCGTAGTGGATTGTAGACTTAGGGATTTTGCTAGGGTTCTTAAGGTTGCGAAAGTTAGTACTAGAGGAGCAGTTTTGGCATGCAAAAATGCATGGCAAAGATCAAATTTCTCTTGGTTTAAATGGAACATGGTTCTTGCAAGAGGCACACGTGTGGTTAGATCGGTTTTTTTGCCTGTTGGAATGGGTTTGGATATTGCTTACATAGGAAGTAGAAATAATGGTGGTGGTGGTGCATCTTCAAGTGGTGGTTCTTCAAAGGGTAATCCTAGCCGTTGGATCAAACACATAGATCAACATTCAGGAGAAGAACATCTTTATAGAGAGAGTAGTTTTTAA 723 0.4481 MKLVWSPETALKSYIDTVKLKSVSNFQPQQQCEKCKESGVAELLSSMAAGWNSKFIVECYSHGGPIAASIGLAVAARNTGARHVCIVPDEGTRLHYTKALAEMGVSPPPEIVRGEAETVIKSLDGLDFLVVDCRLRDFARVLKVAKVSTRGAVLACKNAWQRSNFSWFKWNMVLARGTRVVRSVFLPVGMGLDIAYIGSRNNGGGGASSSGGSSKGNPSRWIKHIDQHSGEEHLYRESSF 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05116 240 Pfam Protein of unknown function (DUF1442) 1 236 IPR009902 -
Vifa2g05116 240 Gene3D Vaccinia Virus protein VP39 7 197 IPR029063 -
Vifa2g05116 240 PANTHER DUF1442 FAMILY PROTEIN 1 236 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05116 Vifa-Chr2 1528168597 1528169679 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05116 - - psat:127107552 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05116 2 1528168597 1528169679 Vifa2g05116 2 1528168597 1528169679 ECH