Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05104 ATGGAAATCGGTATGCTACCAATCTCCGCATCAAAGAGAGGAAAACTCTTAGCCGCCGGTTACACAACGCTCCAAGCCATTTCTCGCACTTCCACCATCCACCTTGCTCGAGATATAGAAGTTTCTGAGAATGAAGCCTTGGAAATTCTGAAATTTGCAACCAAAACTAGGGCTTTGGATGGATCAAGTGGGAGTAATAGTAACATTATTGATGGTGGTCAGACTGCTTGGGATATGCTCAATGAGGAGAGATTTTCTTCTCTCATTACCACTTCTTGTGCTGATCTAGATAACATCCTTGGAGGAGGAATTAGTTGCAAAGAAGTCACTGAAATAGGTGGAGTCCCAGGCATGGGTAAAACTCAAATAGGGATTCAACTTGCGGTAAATGTTCAGATTCCACTAGATTATGGTGGTCTAGGTGGAAAGGCAATATACATTGACACTGAAGGAAGCTTTATGATTGAACGTGTTCTACAAATTGCTGAAGCATGCATAGAAGACATCTATACTGAACAGATTGCTTTGGTAAATTACTTGGATAAATTCGTCACGGAGCATAAAGATGTGAAGATCATCATTATTGACAGTGTTACTTTCCACTTCCGCCAAGACTTTGAAGACATGGCTCTCCGAACCCGATTACTTGGTGAAATGTCTTTAAAGTTGATGAAGCTTGCAAGAAACTTTTCTTTGGCTGTTGTTATGTTGAATCAAGTTACAATCAAGCATATGGAAGGTTCATTTCAATTGACCCTTGCACTAGGTGATAGCTGGTCGCATTCTTGCACAAACCGGATCATCTTATATTGGAATGGCGATGAACGACATGCATACATTGACAAGTCTCCTTCTCTTAAATCAGCTTCAGCACCATATTCTGTGACTTCTAGGGGGATACGTAATTGTAATACTACTTCCAGCAGTAAAAGAATCAAGATGATGTGA 948 0.4061 MEIGMLPISASKRGKLLAAGYTTLQAISRTSTIHLARDIEVSENEALEILKFATKTRALDGSSGSNSNIIDGGQTAWDMLNEERFSSLITTSCADLDNILGGGISCKEVTEIGGVPGMGKTQIGIQLAVNVQIPLDYGGLGGKAIYIDTEGSFMIERVLQIAEACIEDIYTEQIALVNYLDKFVTEHKDVKIIIIDSVTFHFRQDFEDMALRTRLLGEMSLKLMKLARNFSLAVVMLNQVTIKHMEGSFQLTLALGDSWSHSCTNRIILYWNGDERHAYIDKSPSLKSASAPYSVTSRGIRNCNTTSSSKRIKMM 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05104 315 PIRSF Rad51 1 306 IPR016467 -
Vifa2g05104 315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 301 IPR027417 -
Vifa2g05104 315 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C 170 315 - -
Vifa2g05104 315 Pfam Rad51 75 303 IPR013632 -
Vifa2g05104 315 Gene3D - 69 304 IPR027417 -
Vifa2g05104 315 SMART AAA_5 106 257 IPR003593 GO:0016887
Vifa2g05104 315 CDD Rad51C 107 284 - -
Vifa2g05104 315 ProSiteProfiles RecA family profile 1. 85 240 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05104 Vifa-Chr2 1526190950 1526194525 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05104 K10870 - qsu:112016681 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05104 2 1526190950 1526194525 Vifa2g05104 2 1526190950 1526194525 ECH