Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05099 ATGCTACCAACTGGAGCTAAAGAGACACAATTACGCGAGACCAACAGTCAGAAAGTCCACCCTCAACCCATGGAAGAAGCCATGAACCAGAATCCAGAAGCCGTGGAAACCCTAGTATCTAAAATTTTCACTAATATCTCTACACTGAAATCAGCTTATATTCAGTTGCAAGCTGCTCATACTCCCTATGACCCTGATAAAATCCACACTGCTGATAAACTTGTTATTAGTGAGCTGAAAAATCTATCTGAACTCAAGCATTTCTACAGGGAAAACAACCCAAAGCCAGTGTGTGTTTCTCCCCAAGACTCACGTTTAGCTGCAGAAATTCAAGAGCAACAGAGCCTCCTGAAAACATACGAGGTCATGGTTAAGAAATTTCAGTCGGAAATTCAGAATAAAGATTCAGAGATCCATCAACTTGAAAAGCAGATTGAGGAGGCTAGTCAGAAGCGAGCAAAACTAGAAAAGAATCTAAAACTTAGAGCTGCTAAAGCAATTCATGATTTTTCTAAACCTTTGATCAACATGATGAAAGCAGCTGGGTGGGACCTTGACGCTGCTGCCAACTCAATCGAACCGAATGTTGTTTATGCAAAGAGAGCTCATAAGAAATATGCGTTCGAGTCTTACATATGCCAAAGAATGTTTGGTGGTTTCGAGCAAGAAAGCTTCTCTGTCAACTCAGACAGTATTACAGTCAATAAAGAGAGCTTCTTCCACCAATTTCTTGCGTTAAGGGAGATCGATCCTTTGGACATGCTAGGGCAAAATCCAGATTCCATATTTGGGAAATTTTGCAGCAGCAAATACCTAGCGGTAGTTCATCCTAAGATGGAAGCATCATTCTTCGGAAACCTAGATCAGCGAAATTATGTGATGGGTGGAGGGCATCCAAGAACTCCTTTTTACCAAGCTTTTCTAAAACTAGCGAAGTCAATTTGGCTTTTGCACAAATTGGCTTATTCTTTTGAGCCAAATGTCAAAGTATTTCAGGTTAAAGGAGGGAGCGAGTTCTCCGATGTTTACATGGAAAGTGTTGTCAATAATCTAATAATGAATGAAAATGACGAAAAGCCGAAAGTTGGTTTGATGGTTATGCCAGGCTTCTGGATTGGAGGAAGTGTGATTCAGAGTAAAGTTTATCTCACTGGTATGAAGGTAGCTGAATGA 1173 0.4058 MLPTGAKETQLRETNSQKVHPQPMEEAMNQNPEAVETLVSKIFTNISTLKSAYIQLQAAHTPYDPDKIHTADKLVISELKNLSELKHFYRENNPKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLEKQIEEASQKRAKLEKNLKLRAAKAIHDFSKPLINMMKAAGWDLDAAANSIEPNVVYAKRAHKKYAFESYICQRMFGGFEQESFSVNSDSITVNKESFFHQFLALREIDPLDMLGQNPDSIFGKFCSSKYLAVVHPKMEASFFGNLDQRNYVMGGGHPRTPFYQAFLKLAKSIWLLHKLAYSFEPNVKVFQVKGGSEFSDVYMESVVNNLIMNENDEKPKVGLMVMPGFWIGGSVIQSKVYLTGMKVAE 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05099 390 Pfam Plant protein of unknown function (DUF641) 31 157 IPR006943 -
Vifa2g05099 390 Coils Coil 110 165 - -
Vifa2g05099 390 MobiDBLite consensus disorder prediction 1 25 - -
Vifa2g05099 390 MobiDBLite consensus disorder prediction 8 24 - -
Vifa2g05099 390 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 12 384 IPR040225 GO:0009639|GO:0009959
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05099 Vifa-Chr2 1525482143 1525483402 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05099 - - gmx:100499972 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g05099 2 1525482143 1525483402 Vifa2g05099 2 1525482143 1525483402 ECH