Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05095 ATGTCCAGTGAATCCGATGCATCCGTAAACAAACTCTCTTGCGCCAACTGTTCCAAACCTGCAAATCTTCAGTGTCCGAAATGCATGGAATTGAAGCTTCCTCGGGAAGGTTCTGCATTCTGCTCTCAAGAATGTTTTAAATCTTCGTGGAGTTCGCACAAATCAGTGCATCTGAAGGCAAAGCTATCTTCAGCTGGTACACAGAATTCAGACTCAGTTGGTGAAGGATGGCTATATTGCGTGAAGAGAGGGCAGGGTCGAAGTCCAAAGCTTCCTTACTATGACTGGACTGGGGCGCTGCGGCCATATCCTATATCTCCTAAACGGATTGTCCCAGCTCATGTTGTTATACCTGATTGGGCTGATGATGGAATTCCCATAATTGAGCCCAATAGTGATCTGCAGCATACTGTTGAGATCAAGTCACCAGATCAAATCGAAAGAATGAGAGAAACTTGTCGGATTGGAAGAGAGGTGTTGGATGCTGCTGCTCGGATTATTCAGCCCGGCGTGACAACTGATGAAATTGATAGAGTAGTTCACGAGGCAACTATTGCTGCAGGAGGATACCCATCACCTCTCAATTACCATTTCTTTCCAAAATCTTGCTGCACGTCTGTTAATGAAGTGATCTGCCATGGAATTCCTGATGCAAGGAAGCTCGAGGACGGTGACATTGTAAATGTTGATGTCACTGTATACTATAAAGGTGTTCATGGTGATCTCAATGAAACGTACTTTGTGGGAAATGTGGACGAAGAGTCACGTCAGTTGGTCAAATGCACATATGAGTGCCTGGATAAGGCAATATCCATTGTTAAACCTGGGGTACGATTCCGTGAAGTTGGCGAAGTTATTAATCGTCATGCTTCAATGTCAGGCTTCTCAGTGGTAAAATCGTATTGTGGTCATGGAATTGGAGAGCTTTTCCATTGTGCACCAAACATTCCTCATTATGGAAGAAATAAAGCAGTTGGTGTGATGAAGGCTGGTCAGACTTTTACAATTGAACCAATGATTAATGCAGGTGTCTGGCGAGATCGATTGTGGCCTGATGGATGGACTGCTGTTACAGCAGATGGTAAACGAAGTGCCCAATTTGAGCATACTCTTTTGGTGACAGAAACTGGTGTCGAAGTTTTAACAGGGAGGTTGCAGACATCACCCAATGTTTTTCCTTGGTTAAATTCATAA 1194 0.4405 MSSESDASVNKLSCANCSKPANLQCPKCMELKLPREGSAFCSQECFKSSWSSHKSVHLKAKLSSAGTQNSDSVGEGWLYCVKRGQGRSPKLPYYDWTGALRPYPISPKRIVPAHVVIPDWADDGIPIIEPNSDLQHTVEIKSPDQIERMRETCRIGREVLDAAARIIQPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGVHGDLNETYFVGNVDEESRQLVKCTYECLDKAISIVKPGVRFREVGEVINRHASMSGFSVVKSYCGHGIGELFHCAPNIPHYGRNKAVGVMKAGQTFTIEPMINAGVWRDRLWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTGRLQTSPNVFPWLNS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05095 397 Hamap Methionine aminopeptidase [map]. 138 384 IPR002467 GO:0006508|GO:0070006
Vifa2g05095 397 FunFam Methionine aminopeptidase 94 390 - -
Vifa2g05095 397 Pfam Metallopeptidase family M24 147 375 IPR000994 -
Vifa2g05095 397 Gene3D Creatinase/methionine aminopeptidase superfamily 94 393 IPR036005 -
Vifa2g05095 397 SUPERFAMILY HIT/MYND zinc finger-like 11 55 - -
Vifa2g05095 397 NCBIfam methionine aminopeptidase, type I 139 383 IPR002467 GO:0006508|GO:0070006
Vifa2g05095 397 CDD MetAP1 146 382 IPR002467 GO:0006508|GO:0070006
Vifa2g05095 397 PANTHER METHIONINE AMINOPEPTIDASE 12 384 - -
Vifa2g05095 397 Gene3D - 2 60 - -
Vifa2g05095 397 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 301 319 IPR002467 GO:0006508|GO:0070006
Vifa2g05095 397 SUPERFAMILY Creatinase/aminopeptidase 92 383 IPR036005 -
Vifa2g05095 397 Pfam zf-MYND-like zinc finger, mRNA-binding 15 58 IPR031615 -
Vifa2g05095 397 PRINTS Methionine aminopeptidase-1 signature 203 216 IPR001714 -
Vifa2g05095 397 PRINTS Methionine aminopeptidase-1 signature 225 241 IPR001714 -
Vifa2g05095 397 PRINTS Methionine aminopeptidase-1 signature 295 307 IPR001714 -
Vifa2g05095 397 PRINTS Methionine aminopeptidase-1 signature 326 338 IPR001714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05095 Vifa-Chr2 1524902858 1524908691 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05095 K01265 - gmx:100813779 759.599