Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05063 ATGGCGAAACGCAAGAAATCCGAATCCAGTTCACAATCCGTGGGTAATGGGAGTAGCATATCGGAGTATGAGGAACAAAGACTACGGAGAATTGCAGAAAACCAAGCGAAGTTGAAGGCTATGGGTTTACCCCAAATGGTCTCTTCCTTGAAAACCTTGCCTCAGATTAAGCAATTGAAGAAGGGAAAGGAAAATGTTGAAGATGATGATGAAGAGTATATACCAGAAAATGAAGAGGAACGAGAAACCGAATCAGATTCTTCTGGTGAACATGACTCTGAGTTTGAAAATGCTTCTGGGTCACGGAAAAGGAAGGCGAAGAGCAAAAGTTTGAAGGTGAAAAGTAGAGTAACCGGAAAGAAGCACGGTGGTAATTTAGATTATGTTGATGAAGAAGAAGAAGCTTGGCTGCAGGCGATTGCTCTTTCTCTGCAAAATTCTGCAGAACCTTCAGGTTGCTCTAACATGAATGTAGGGAACATCAGCAAGGCCGAGAAAAAGGAAAACATTCACACTCAAGAAGATAGGGAACAAAAGAACAAAAAATCGTTTATTAGTCGGCTGCAAATGACTGAAGACGAATTTATTGTACACTTCTTCCAGCTTGATGAAGCAGGAAAAGGAACCGTAACAAAAAGGGATTTAGAACGAGCTGCTATAACTCATGATTTTGCATGGACAGACAATGAGTTGGTTGATATGATTCGCTGTTTTGATAGTGACGGAGATGGAAGGCTAAGTCTAGATGATTTTCGCAAGATTGTTGTTCGCTGCAACATGATAAAAGACTCGCAGAATTCTTGA 804 0.4092 MAKRKKSESSSQSVGNGSSISEYEEQRLRRIAENQAKLKAMGLPQMVSSLKTLPQIKQLKKGKENVEDDDEEYIPENEEERETESDSSGEHDSEFENASGSRKRKAKSKSLKVKSRVTGKKHGGNLDYVDEEEEAWLQAIALSLQNSAEPSGCSNMNVGNISKAEKKENIHTQEDREQKNKKSFISRLQMTEDEFIVHFFQLDEAGKGTVTKRDLERAAITHDFAWTDNELVDMIRCFDSDGDGRLSLDDFRKIVVRCNMIKDSQNS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05063 267 Gene3D - 151 266 - -
Vifa2g05063 267 MobiDBLite consensus disorder prediction 1 26 - -
Vifa2g05063 267 ProSitePatterns EF-hand calcium-binding domain. 239 251 IPR018247 -
Vifa2g05063 267 ProSiteProfiles EF-hand calcium-binding domain profile. 226 261 IPR002048 GO:0005509
Vifa2g05063 267 SUPERFAMILY EF-hand 183 259 IPR011992 -
Vifa2g05063 267 MobiDBLite consensus disorder prediction 69 83 - -
Vifa2g05063 267 MobiDBLite consensus disorder prediction 7 22 - -
Vifa2g05063 267 MobiDBLite consensus disorder prediction 104 119 - -
Vifa2g05063 267 SMART efh_1 230 258 IPR002048 GO:0005509
Vifa2g05063 267 MobiDBLite consensus disorder prediction 42 125 - -
Vifa2g05063 267 MobiDBLite consensus disorder prediction 84 103 - -
Vifa2g05063 267 Pfam EF-hand domain pair 198 255 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05063 19 264 EF-hand Containing Proteins AT1G73440 38.211 3.98e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05063 - - gmx:100806103 252.677