Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05056 ATGAAATTTGGGAAGAGATTGAAGCAACAAGTTCAAGACACTTTGCCCGAATGGAGAGACAAGTTTTTGTCATATAAAGAATTGAAGAAACTTTTGCGACTTTTATCCACTGCACCAAGTTCTTTGCTAAATGGTTCTGTTGGTTATGGAAAAGGTGAAGCTGAGTTTATGTATTTGTTGAACAATGAGATTGATAAATTCAATGGATTCTTCATGGAACAAGAAGAGGATTTCATCATCCGACACAAGGAAGTACAACAGAGAATCAAAAGAGTAGTTGATTTATGGGGACCAAATGGTACTCAAGCTTCTGAAGAAGATTATAAAGAGGAAATGGAAAAAATAAGAAAAGCTATTGTTGATTTTCATGGTGAAATGGTTCTCTTAGTAAATTACAGCAACATTAACTATACAGGGTTGGCTAAAATTTTGAAAAAGTATGATAAGAGAACCGGAGGTTTACTACGTTTACCATTCATTCAAAAAGTATTGGAGCAACCCTTTTTCACAACCGATTTAATTTCGAAACTCGTGAAAGAATGCGAAAGTATAATCGATGCGGTGTTTCCGATCGAAGAAGAAGCTGAAAGAGCAAAAGCAGAAGTTGTAGTAGCTGGTGAAGGGATTTTCAGAAACACTGTTGCAGCTTTACTTACAATGCAAGAAATGAGAAAAGGAAGTTCAACACAAAGTGCTTTTTCTTTGCCTCCTCTCAATTTGCCAGATTCTGATCTTATTCAATCAATACAGCTTAATGCTGCTGTTCCAATTGTTTAG 777 0.3565 MKFGKRLKQQVQDTLPEWRDKFLSYKELKKLLRLLSTAPSSLLNGSVGYGKGEAEFMYLLNNEIDKFNGFFMEQEEDFIIRHKEVQQRIKRVVDLWGPNGTQASEEDYKEEMEKIRKAIVDFHGEMVLLVNYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVLEQPFFTTDLISKLVKECESIIDAVFPIEEEAERAKAEVVVAGEGIFRNTVAALLTMQEMRKGSSTQSAFSLPPLNLPDSDLIQSIQLNAAVPIV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05056 258 CDD SPX_AtSPX1_like 2 150 - -
Vifa2g05056 258 ProSiteProfiles SPX domain profile. 1 161 IPR004331 -
Vifa2g05056 258 Pfam SPX domain 102 162 IPR004331 -
Vifa2g05056 258 Pfam SPX domain 1 33 IPR004331 -
Vifa2g05056 258 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 240 IPR031142 GO:0016036
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05056 Vifa-Chr2 1506054693 1506056566 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05056 - - gmx:100778590 432.565