Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05053 ATGTGGACGCATCAGCAACTGCCCCAACCAGTGCCACCCCACACACTCTTCCATTCTTATTCACCTTCAAATCACACAAAGGTTCCATCTTTCGCAAAAGTAAATTCCACCCACAATACCAAAATTCGCAATGGAATTAGGAAGAGTACAATTCCTTTGGAAGAACTTCCCCCAAACGCGCTTCGGAGGAAGATGGAAGCAGATTGGATAGGAGGATTCTCCCTTGGAGTGGACCTCGGAATGGCTCGCACTGGCCTTGCACTCAGCAAAGGCTTTGTTGTTCGCCCTTTAACGGTTTTGGAACTGCGAGGACAGAAACTTGAGGTCCAGATAATGAACATTGCCGAAAAAGAGGAGGCTGATGAGTTTATAATTGGACTTCCAAAATCTTCCGACGGAAAGGAAACGACACAGTCAAACATAATCCGTACAGTTGCTGGAAGGCTTGCTGTTCGAGCTGCTGAGAGGGGTTGGAGAGTATATCTACAGGATGAACACGGGACAACAGCAGATGCCATCGATCGAATGGTCGACATGGGCTTAAGTTTGTCTACTCGACAGAAGAAACTTGATGCATATGCTGCCACGTTGTTACTTGAGAGATATTTCTCGACCTCGGGTCAGAAAACTGAACTGGTTTTGCCGAAGAATCTTGAACTACAAGGAAAACTTAGAAAGGGGCCTCCGAGAGATGAAGATTTTTACTCCGATGAGGATTAA 720 0.4611 MWTHQQLPQPVPPHTLFHSYSPSNHTKVPSFAKVNSTHNTKIRNGIRKSTIPLEELPPNALRRKMEADWIGGFSLGVDLGMARTGLALSKGFVVRPLTVLELRGQKLEVQIMNIAEKEEADEFIIGLPKSSDGKETTQSNIIRTVAGRLAVRAAERGWRVYLQDEHGTTADAIDRMVDMGLSLSTRQKKLDAYAATLLLERYFSTSGQKTELVLPKNLELQGKLRKGPPRDEDFYSDED 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05053 239 Hamap Putative pre-16S rRNA nuclease [yqgF]. 72 207 IPR005227 GO:0006364
Vifa2g05053 239 Gene3D - 74 212 IPR037027 GO:0006139
Vifa2g05053 239 CDD YqgF 75 203 IPR005227 GO:0006364
Vifa2g05053 239 Pfam Holliday junction resolvase 74 204 IPR005227 GO:0006364
Vifa2g05053 239 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 51 223 IPR005227 GO:0006364
Vifa2g05053 239 SMART rnase_8s 72 172 IPR006641 GO:0006139
Vifa2g05053 239 SUPERFAMILY Ribonuclease H-like 73 205 IPR012337 -
Vifa2g05053 239 FunFam Holliday junction resolvase 74 211 - -
Vifa2g05053 239 NCBIfam Holliday junction resolvase RuvX 75 203 IPR005227 GO:0006364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05053 - - tpra:123920019 387.882