Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05040 ATGGGTTACTCAACTGTGGTAACTAAGGTTGTTTGTTTGGCAATTGTGTGCCTTGTGAGTTTTGGTCCTAAGACGGGAGAAGCTGTGACATGTGGTCAAGTTGTGAACGGCTTAATGCCTTGTGTTTCTTACATTATGAATGGTGGGAATGTGCCTGTGCGGTGTTGTAATGGAATTAGGGGTCTTAATACCATGGCTCAAACCCCTACTGATCGTAGAGCTGTTTGTAGCTGCATTAAGAATGCCGTTACCTCAAGTGGTTTCAGTTACTCTAACACCAATCTTAACAATGCTGCTGGCCTTCCAACCAAATGTGGGGTTAACATTCCTTACCGTATCAGCCCCAATACCGACTGTAAAAGTGTGAACTGA 372 0.4409 MGYSTVVTKVVCLAIVCLVSFGPKTGEAVTCGQVVNGLMPCVSYIMNGGNVPVRCCNGIRGLNTMAQTPTDRRAVCSCIKNAVTSSGFSYSNTNLNNAAGLPTKCGVNIPYRISPNTDCKSVN 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05040 123 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 121 IPR036312 -
Vifa2g05040 123 PRINTS Plant phospholipid transfer protein signature 50 64 IPR000528 GO:0006869|GO:0008289
Vifa2g05040 123 PRINTS Plant phospholipid transfer protein signature 30 46 IPR000528 GO:0006869|GO:0008289
Vifa2g05040 123 PRINTS Plant phospholipid transfer protein signature 110 121 IPR000528 GO:0006869|GO:0008289
Vifa2g05040 123 PRINTS Plant phospholipid transfer protein signature 92 109 IPR000528 GO:0006869|GO:0008289
Vifa2g05040 123 Gene3D - 28 123 IPR036312 -
Vifa2g05040 123 Pfam Protease inhibitor/seed storage/LTP family 31 119 IPR016140 -
Vifa2g05040 123 CDD nsLTP1 29 120 - -
Vifa2g05040 123 ProSitePatterns Plant lipid transfer proteins signature. 101 122 IPR000528 GO:0006869|GO:0008289
Vifa2g05040 123 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 10 120 IPR000528 GO:0006869|GO:0008289
Vifa2g05040 123 SMART aai_6 31 119 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05040 Vifa-Chr2 1498342247 1498343264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05040 7 122 Acyl Lipid Metabolism Gene Families AT2G38540 43.590 1.35e-29 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05040 - - pvy:116122969 154.066