Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05030 ATGGATGAGCATGTAGCAGCTTTGCACACTGCTACTAACGCTTTGCAGGCATTAGGAAGGGGTTTTGATGTTAATTTTGATACTAGGTTGCTTTATTGTAAAGGCGTTTCAGGTTCTAGGGTGGTTGAGATTGATGAACAGTTTCAAAGGGATTTGTGTTTGTATGATGATGTTGTTGTTCCCAAGGTTTCAAGGGATATTAGAGCCTTTGGTGAATCTATGGGAAGGCAGAGTTCTGGTGTCTGCAGTTTTCAAGAGATGGTAGATTATTTCAATCATAAGGCAGATATACCCGGGAGTAATCCTCTCGGGAGCTTCAACTCTGCATTTAGCTTTACTGGTTCAAAACATGTTGATGCTGCAGCTACAAAAACCTTGTCTTCTGACATGTTTTACATTCCCCTTGCAAAGGTTCAGCTTCAAAAATCGAACTTAACGTTGCAAGAAAATGTCAAAAGGGCTATCCCGATCAATTGGGATCCACCTTTCTTGGCAAGCTTCATTGAAACTTTTGGGACACATATCATTACATCGATAACTATTGGCGGTAAAGATGTTATATACGTCAAGCAACACCACACTTCACCTTTTTCAAAGTTGGAAATAAAAAATTATATTCAGGATATTGGAAATCAAAGGTTCTCTGACATCAATAGCCACACAAGTTCAGGTCAAACAAAATCCAAGGATAAGGGCGTTGAACCGTTTTCATTCAATAGCCAAGGGATTTACCCTCAACCTACAACTGCAACATATTCTACCGGGAAAGAAGATGTCACAGTCATATTTAGAAGAAGAGGAGGTGACGATTTGGAACAAAACCACCGTGTATGGTTAACAACCGTCAAGTCCTCCCCCGATATAATAGAGATGGCTTTCTGTCCCATAACAGATCTCCTTGACGATATACCGGTCAAGGAGCATTTGACTCGCACAATTGGTCTTTATCTTGAATATAAACCTCCAATTGAAGAACTTAGATACTTCCTAGAGTTTCAGATTCTCCGTGTTTGGGCTCCTTTACATGACAGGGTTGCCGGTCAACAACGGAAGGAACCTGTTTGCCCGTCTTTACAATTCAGCATAATGGGCCAAAAGCTATATGTCAGTCAAGAACAGATTACAGTTGGACGTAGACCAGTAACCGGCTTACGTCTCTGTCTCGAAGGAAGCAAACAGAATCGGCTGAGTGTGCATATTCAACACTTGGTATCCCTTCCAAAGATTCTCCAGCCATATTGGGACAGCCATGTAGCTATTGGTGCTCCGAAGTGGCAGGGACCCGAGGAACAAGATAGCCGGTGGTTTGAACCGGTTAAGTGGAAGAATTTTTCTCATGTCAGCACCGCGCCTATCGAGAATCCAGAAACCTTCATCGGAGACTTCTCCGGCGTCTTCATAGTCACTGGAGCACAGCTTGGAGTATGGGATTTCGGATCACGGAATGTCCTTTACATTAAGCTCTTATATTCAAGGTTACCCGGTTGCACCATCAGAAGATCACTTTGGGATCACGTACCAAACACGCCGCAAAAAACTGCAATTTCCGGAAACTCTTCGAATGCAGCCAACACAACGAGCTCAGGTTTGAGAGAAAACAACGCCGCAACGAACAAGTTAGCGAAGTACGTTGATTTGTCCGAAATGAGCAAAGGACCTGAAGATCCTCCTGGTCACTGGTTAGTTACTGGCGGAAAGCTCGGTGTCGAAAAAGGGAAAATCGTTTTGCGGTTGAAATACTCATTGCTTAATTACTGA 1758 0.4306 MDEHVAALHTATNALQALGRGFDVNFDTRLLYCKGVSGSRVVEIDEQFQRDLCLYDDVVVPKVSRDIRAFGESMGRQSSGVCSFQEMVDYFNHKADIPGSNPLGSFNSAFSFTGSKHVDAAATKTLSSDMFYIPLAKVQLQKSNLTLQENVKRAIPINWDPPFLASFIETFGTHIITSITIGGKDVIYVKQHHTSPFSKLEIKNYIQDIGNQRFSDINSHTSSGQTKSKDKGVEPFSFNSQGIYPQPTTATYSTGKEDVTVIFRRRGGDDLEQNHRVWLTTVKSSPDIIEMAFCPITDLLDDIPVKEHLTRTIGLYLEYKPPIEELRYFLEFQILRVWAPLHDRVAGQQRKEPVCPSLQFSIMGQKLYVSQEQITVGRRPVTGLRLCLEGSKQNRLSVHIQHLVSLPKILQPYWDSHVAIGAPKWQGPEEQDSRWFEPVKWKNFSHVSTAPIENPETFIGDFSGVFIVTGAQLGVWDFGSRNVLYIKLLYSRLPGCTIRRSLWDHVPNTPQKTAISGNSSNAANTTSSGLRENNAATNKLAKYVDLSEMSKGPEDPPGHWLVTGGKLGVEKGKIVLRLKYSLLNY 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05030 585 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 5 585 IPR044663 GO:0006952|GO:0012501|GO:2000031
Vifa2g05030 585 Pfam MAC/Perforin domain 104 316 IPR020864 -
Vifa2g05030 585 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 330 IPR020864 -
Vifa2g05030 585 SMART MACPF_8 123 318 IPR020864 -
Vifa2g05030 585 MobiDBLite consensus disorder prediction 510 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05030 Vifa-Chr2 1495298853 1495302339 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05030 - - aprc:113849343 1016.53