Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04609 ATGTTTTCTGAAAGATTGGGAGTAGAAGAATCTCGTTTACAAGAAGATTTTCATGGTTTGAGTGTGTCAAAGCGGCTTGTGAGGAGTGTTAGTCAGAAATTGAGGAAGAAGAATAATAATAGAAGTTTAGGGGAAGATGATGATGGTGATAATGATGAGGATGTTAATGGAGTTTCTTTAAAATGTCTGTCGCTTTATGGTCGGGGTGGGGGTTGTAAGGTAGGTGCTGATACTAGTGATGAATTAGGGGATTCGAGTGCGAGAAGGAGATCTAGTTCGAGTGAAGAAGGGAAGGGGTATAAACCGGTTTGTGCTTACCAGGATACTGCTGTTGTTGATTGTTTCTCGTATGGGGTGAGGGATAGGTTTTGGAGGAGGCATCATAGAAAGAATTCTGAATTTGATGAGCTGGTAAGAAACAATAATAAAATGCATGTTTTTCTTCCGGATGATATTCTTGAAATGTGTTTCATGAGGCTTCCGTTGAGAAGTTTGATGAATGCTAGACTTGTTTGCAAAAAATGGAGGTCGTTGACCACTACACCTAGATTCCTTCAAATGAGAAGGGAAGGTTTGTATCAAAATCCGTGGTTGTTTATGTTTGGTTCTGTTAAAGACGGGTTTTGTTCGGGTGAGATACATGCGTTGGATGTGTCTCAAAATCAATGGCATAGGATTGATGCTGGTTTTCTCAGAGGAAGGTTCTTGTTCTCTGTTGCTAGTGTACAAGATGATATCTTCATTGTTGGAGGGTGTTCTAGCTTAACTAACTTTGGGAAAGTGGATAGGAGCTCATTCAAGACGCACAGAGGGGTGCTTTCGTTTAGCCCCTTGACAAAATCTTGGCGCAAAATGCCGTCTATGAAATATGCTAGATCAATTCCTATACTTGGAGTCTTTGAAGTCAGTTTGGATTTTTCAAGTTGTCAAAGTCATCAAAGTCGGCAAGACAAACGTTTTCCAAGATCAAGGATTGGTGGGGTTTCAGACGTCTATGAGGATCCTCATAAGCTTTCAATGAGACGTCATTGCAGATCTACCTTTAACGAGACCGAAGCTTCCTCTTTGCATGGTAGAAAGGCACACAAGTTCCTGAGACAAATAAGTGATCTTTCAAGCTCAAAGAGTAGTAGAAGATTTTTGGTCATATCTGTAGGGGGTCTGGGATCTTGGGATGAACCCCTGGACTCGGGAGAAATATATGATTCTGCATCTAATAAATGGACCGAAACCCCAAGATTGCCTTTTGATTTTGGGGTTGCTTGTTCCGGAGTTGTATGTGGCAAGATGTTCTATGTTTATTCTGAAACGGACAAACTTGCAGCATATGACATAGAACGGGATTTCTGGATTGCAATTCAAGCCACTCCAGTCCCACCTCGTGTCCATGAGTACTACCCCAAACTTGTATCTTCAAATGGCCGTCTATTCATGCTCTCCGTGTCTTGGTGTGAAGGTGATGGGCAAATTGGACGACGAAACAAGGCCGTTAGAAAACTATGGGAGTTAGATCTCATGTATCTTACCTGGACTGAAGTCTCAGTGCATCCTGATGCTCCAATGGACTGGAATGCTGTATTTGTGGCAGACAAGAACCTGATTTTTGGAGTAGAAATGTTCAAAATTTTCGGCCAGGTGTTGGATTTTTTCACCGTATGTGACGTGTCTGATATAACGAACTGGAACCATATTTCAAGGAATCATGTCACTCATGAGCTCGATGGTTCATCGTGCGTGACCAAATCAGTGGCAGTGCTGCACCTTTGA 1767 0.4205 MFSERLGVEESRLQEDFHGLSVSKRLVRSVSQKLRKKNNNRSLGEDDDGDNDEDVNGVSLKCLSLYGRGGGCKVGADTSDELGDSSARRRSSSSEEGKGYKPVCAYQDTAVVDCFSYGVRDRFWRRHHRKNSEFDELVRNNNKMHVFLPDDILEMCFMRLPLRSLMNARLVCKKWRSLTTTPRFLQMRREGLYQNPWLFMFGSVKDGFCSGEIHALDVSQNQWHRIDAGFLRGRFLFSVASVQDDIFIVGGCSSLTNFGKVDRSSFKTHRGVLSFSPLTKSWRKMPSMKYARSIPILGVFEVSLDFSSCQSHQSRQDKRFPRSRIGGVSDVYEDPHKLSMRRHCRSTFNETEASSLHGRKAHKFLRQISDLSSSKSSRRFLVISVGGLGSWDEPLDSGEIYDSASNKWTETPRLPFDFGVACSGVVCGKMFYVYSETDKLAAYDIERDFWIAIQATPVPPRVHEYYPKLVSSNGRLFMLSVSWCEGDGQIGRRNKAVRKLWELDLMYLTWTEVSVHPDAPMDWNAVFVADKNLIFGVEMFKIFGQVLDFFTVCDVSDITNWNHISRNHVTHELDGSSCVTKSVAVLHL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04609 588 FunFam F-box/kelch-repeat protein isoform A 161 309 - -
Vifa2g04609 588 PANTHER OS09G0555300 PROTEIN 1 588 - -
Vifa2g04609 588 Pfam Kelch motif 234 288 IPR006652 GO:0005515
Vifa2g04609 588 Pfam F-box domain 148 184 IPR001810 GO:0005515
Vifa2g04609 588 ProSiteProfiles F-box domain profile. 142 188 IPR001810 GO:0005515
Vifa2g04609 588 SMART fbox_2 148 188 IPR001810 GO:0005515
Vifa2g04609 588 MobiDBLite consensus disorder prediction 82 96 - -
Vifa2g04609 588 SUPERFAMILY F-box domain 147 210 IPR036047 GO:0005515
Vifa2g04609 588 MobiDBLite consensus disorder prediction 31 52 - -
Vifa2g04609 588 SUPERFAMILY Kelch motif 382 536 IPR015915 GO:0005515
Vifa2g04609 588 Gene3D - 369 573 IPR015915 GO:0005515
Vifa2g04609 588 FunFam F-box/kelch-repeat protein isoform A 346 573 - -
Vifa2g04609 588 SUPERFAMILY Kelch motif 195 299 IPR015915 GO:0005515
Vifa2g04609 588 CDD F-box_AtFBW1-like 147 184 - -
Vifa2g04609 588 Gene3D - 158 301 IPR015915 GO:0005515
Vifa2g04609 588 MobiDBLite consensus disorder prediction 77 99 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04609 - - ccaj:109802378 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04609 2 1358051905 1358053671 Vifa2g04609 2 1358051905 1358053671 ECH