Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04596 ATGACTAAAGCTGTGGAAGAAGAGAAGAAGAAAATGATGGAAGGAGAAGAAGTCATACCCCTCCTAACCCCATACAACATGGGAAAATTTAATCTATCCCACAGGATAGTGTTGGCACCATTAACAAGAACAAGGTCCTACAACTTTGTGGCTCAACCACATGCTGCTCTTTATTACTCTCAAAGAACAACAAATGGTGGTTTCTTGATTGGTGAAGCCTCGGGGATCTCAGACACTGCACAAGGGTATCCAAATACACCTGGTATTTGGATAAAAGAGCAAGTAGAAGCATGGAAACCCATTGTTGAAGCTGTTCATAAAAAAGGAGGCATTTTCTTTTGTCAACTTTGGCATGCTGGAAGAGTATCCAACTATGGTTACCAACCAAATGGACAACCTCCAATCTCGAGCACAGACAAAGCACTGCAAAAGGAAGGCAGCAGCTCTAAGTACCCGCCTCCTCGACGTCTCACACCGGATGAAATCTCGGATGTTGTCAATGACTTCAAACTGGCAGCCAATAATGCCATAGAAGCCGGTTTTGATGGAGTGGAGATACACGGTGCTAATGGATACTTACTTGACCAATTCCTAAAAGACAAAGTAAACGACAGAGAGGACGCGTACGGAGGAACCATAGAAAATCGCTGTCGCTTCCCCTTAGAGGTTGTTAAAGCCGTTGCTGATGAGATCGGTGCTGAAAAAGTCGGTGTTAGGCTCTCTCCTTTCGCTGATTACTGTGGTTGTGGAGACTCTAACCCTCAAGCTTTAGGAATTTACATGGCTAAGTCATTGAGTCAACTAGGAATTCTTTACTGTCATGTGATTGAACCTAGGATGCAGACCATGTTTGATAAAGATGAGACTAATGTGTCTTTGATGCCGATGCGAAAGGCTTTCGATGGAACGTTTATTGTTGCTGGTGGATATGATAGGAGTGATGGAAACAATGTGTTGGAGAATGATGGTGCAGATTTGGTTGCTTATGGTCGATTGTTTTTGGCGAATCCGGATTTGCCTAGAAGGTTTGAGTTGGATGCTGAATTGAATAAGGCTGATAAGAGCACTTTTTACACCAGTGATCCTGTTGTTGGATATACAGATTATCCATTTCTTGAAAATGCTAGCTGA 1131 0.4297 MTKAVEEEKKKMMEGEEVIPLLTPYNMGKFNLSHRIVLAPLTRTRSYNFVAQPHAALYYSQRTTNGGFLIGEASGISDTAQGYPNTPGIWIKEQVEAWKPIVEAVHKKGGIFFCQLWHAGRVSNYGYQPNGQPPISSTDKALQKEGSSSKYPPPRRLTPDEISDVVNDFKLAANNAIEAGFDGVEIHGANGYLLDQFLKDKVNDREDAYGGTIENRCRFPLEVVKAVADEIGAEKVGVRLSPFADYCGCGDSNPQALGIYMAKSLSQLGILYCHVIEPRMQTMFDKDETNVSLMPMRKAFDGTFIVAGGYDRSDGNNVLENDGADLVAYGRLFLANPDLPRRFELDAELNKADKSTFYTSDPVVGYTDYPFLENAS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04596 376 CDD OYE_like_FMN 20 353 - -
Vifa2g04596 376 PANTHER NADH OXIDOREDUCTASE-RELATED 17 372 IPR045247 GO:0010181|GO:0016491
Vifa2g04596 376 Pfam NADH:flavin oxidoreductase / NADH oxidase family 21 347 IPR001155 GO:0010181|GO:0016491
Vifa2g04596 376 MobiDBLite consensus disorder prediction 128 159 - -
Vifa2g04596 376 SUPERFAMILY FMN-linked oxidoreductases 20 372 - -
Vifa2g04596 376 MobiDBLite consensus disorder prediction 128 145 - -
Vifa2g04596 376 Gene3D Aldolase class I 8 376 IPR013785 -
Vifa2g04596 376 FunFam 12-oxophytodienoate reductase 3 14 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04596 Vifa-Chr2 1355169958 1355171648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04596 14 376 Acyl Lipid Metabolism Gene Families AT1G76690 66.576 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04596 K05894 - gmx:100790284 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04596 2 1355169958 1355171648 Vifa2g04596 2 1355169958 1355171648 ECH