Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04568 ATGGCTGATCTTCTTTCTCTTTCATCTTTTCTCTTCACAATCACCATCTACTTCCTCTCTTCTTCCCAAGATCTCTTCTCTGTTCATGGCGAATCTACCAACAATTTCACTCAATTTTCAGTTACACCAATCAACTACGATCTCTATCATTCCAGTCGAAAATTGATGGATGAGATCAAGGACTTGGTACATCGTCATCCTGATAAGCTTTCTATGGAGACAGTTAAAGCTGGAAACAAAGGCTATGGTGCTGAGATTGCGGTGGTTACTTTTTGTAAGGGAAAGAAAGATACTGCTGAGAGGCCAAAGCTTCGGGTCCTTCTTAGTTTTGGACAGCATGGAAGGGAGCTTATTACCTCAGAACTTGCTTTAAAGATTTTGTCTATTCTTAGTGAAGAACAATTTCTACCCGGCATGGATAAAGCTTCCTTAAACACTACACTTGACCAGCTTGTAATAAAGGTGATTCCTATGGAAAACTCTAATGGCCGCAAACTTGTCGAGGCTGGAGATCTCTGTGAGAGAAGAAACGGGAGAGGAGTTGATCTCAACCGAAACTGGAGTGTAGATTGGGGCAAAAAGGAAAAGGATTATGATCCATATGAGGAGAATCCCGGAATTGCGCCATTTAGCGAGCCTGAAAGTCAAATTATGAGGAAACTTGCGATATCTTTTGAACCACATATATGGGTCAATGTACACTCTGGAATGCAGGCTCTTTTTATGCCATATGATCACAAGAATACAACACCTGGTGGATTGCCATTGCAACGGATGAAATCGTTGCTTGAAGAAGTAAATCAGCATCATTGCCAAAAGCGTTGTGTGATTGGGTCTGGAGGAGGTTCCGTAGGCTATTTTGCGCACGGGACAGCAACCGATTTCATGTATGACGTTGTGAGGGTTCCCTTGGCCTTCACCTTTGAGATATATGGGGATGCAATGGCTGCATCAAATGACTGTTTTAGAATGTTTAATCCCACTGATCGTGCTAGCTACAATACTGTTCTCGATGACTGGTCTGCAGCTTTCTTTACAATTTTTAAATTGGGGCCACACCAGCTTGGTGAGATTCAATCAAAAGCATCTGTCGTTAAGTTGGATAAGTTAGTATCGATAGATGAATATCTAGATGGGTATTTGATGGAGAGAAGGAATAGATATGGAAAAAAGATGGAGGTACTTGAGCTTGGAATGCAAGAAATCAGAACATATTATAGGCTCTTTTTACTGTCGTCAGTTTTACTATTGTGCATGTTCTGTTCTAGAATTTCAAAAACTAAAACTAAGGGCAGTAGACCAATTGTTTCTGCTATTCCCCTTTAA 1326 0.4087 MADLLSLSSFLFTITIYFLSSSQDLFSVHGESTNNFTQFSVTPINYDLYHSSRKLMDEIKDLVHRHPDKLSMETVKAGNKGYGAEIAVVTFCKGKKDTAERPKLRVLLSFGQHGRELITSELALKILSILSEEQFLPGMDKASLNTTLDQLVIKVIPMENSNGRKLVEAGDLCERRNGRGVDLNRNWSVDWGKKEKDYDPYEENPGIAPFSEPESQIMRKLAISFEPHIWVNVHSGMQALFMPYDHKNTTPGGLPLQRMKSLLEEVNQHHCQKRCVIGSGGGSVGYFAHGTATDFMYDVVRVPLAFTFEIYGDAMAASNDCFRMFNPTDRASYNTVLDDWSAAFFTIFKLGPHQLGEIQSKASVVKLDKLVSIDEYLDGYLMERRNRYGKKMEVLELGMQEIRTYYRLFLLSSVLLLCMFCSRISKTKTKGSRPIVSAIPL 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04568 441 SMART zn_carb 49 331 IPR000834 GO:0004181|GO:0006508|GO:0008270
Vifa2g04568 441 FunFam Carboxypeptidase A6 45 340 - -
Vifa2g04568 441 Pfam Zinc carboxypeptidase 59 333 IPR000834 GO:0004181|GO:0006508|GO:0008270
Vifa2g04568 441 PANTHER PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B 40 335 - -
Vifa2g04568 441 CDD M14-CPA-like 103 325 IPR034269 -
Vifa2g04568 441 Gene3D Zn peptidases 44 336 - -
Vifa2g04568 441 SUPERFAMILY Zn-dependent exopeptidases 44 341 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04568 - - gmx:100813842 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04568 2 1344742256 1344748847 Vifa2g04568 2 1344742256 1344748847 ECH